RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 AGPAT4Q9NRZ5 378 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 MKL2Q9ULH7 1088 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 GVINP1Q7Z2Y8 2422 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 KNTC1P50748 2209 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 FAM186AA6NE01 2351 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 TCRBV16S1A1N1A0A5B0 115 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 VSTM2BA6NLU5 285 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 DLL1O00548 723 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 TM4SF5O14894 197 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 IFNA16P05015 189 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 TFPTP0C1Z6 253 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 FASP25445 335 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 KHKP50053 298 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 CDK6Q00534 326 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 CHRNB3Q05901 458 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 BIKQ13323 160 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 NKG7Q16617 165 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 DCAF12Q5T6F0 453 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 INTS11Q5TA45 600 aaKnown RBP16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 ENPP6Q6UWR7 440 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 CCDC80Q76M96 950 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 LGI4Q8N135 537 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 FAM86B1Q8N7N1 296 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 SLC38A5Q8WUX1 472 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 SEPHS2Q99611 448 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 CHID1Q9BWS9 393 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 ACTRT3Q9BYD9 372 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 YY1AP1Q9H869 796 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 ADAP2Q9NPF8 381 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 IFT80Q9P2H3 777 aaPredicted RBP16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 PISDQ9UG56 409 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 RPS6KA6Q9UK32 745 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 KCNE3Q9Y6H6 103 aa16.93■□□□□ 0.3
SMARCD3-202ENST00000356800 CCDC187A0A096LP49 1063 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 TEX51A0A1B0GUA7 166 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 PRKD3O94806 890 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 CDK4P11802 303 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 PEX2P28328 305 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 AQP1P29972 269 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 GALNSP34059 522 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 RAB15P59190 212 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 NHLH1Q02575 133 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 OCA2Q04671 838 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 ELOAQ14241 798 aaKnown RBP16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 MYBPC3Q14896 1274 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 EXOSC6Q5RKV6 272 aaKnown RBP16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 PLPP5Q8NEB5 264 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 PTPMT1Q8WUK0 201 aaPredicted RBP16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 XAGE5Q8WWM1 108 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 PYURFQ96I23 114 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 RNF145Q96MT1 663 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 OR7D2Q96RA2 312 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 PELOQ9BRX2 385 aaKnown RBP16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 TACO1Q9BSH4 297 aaKnown RBP16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 SLC26A1Q9H2B4 701 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 C14orf105Q9NVL8 296 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 LRRC42Q9Y546 428 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 V9GYQ6 96 aa16.92■□□□□ 0.3
SMARCD3-202ENST00000356800 PLD2O14939 933 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 CSRP1P21291 193 aaKnown RBP16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 SSTR4P31391 388 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 ANXA11P50995 505 aaKnown RBP16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 FUT5Q11128 374 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 ZNF267Q14586 743 aaPredicted RBP16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 NSDHLQ15738 373 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 LRRC23Q53EV4 343 aaPredicted RBP16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 LPCAT4Q643R3 524 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 HMBOX1Q6NT76 420 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 CDC73Q6P1J9 531 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 MRPL14Q6P1L8 145 aaKnown RBP16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 FAM199XQ6PEV8 388 aaPredicted RBP16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 ZNF517Q6ZMY9 492 aaPredicted RBP16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 CBLL1Q75N03 491 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 EIF3MQ7L2H7 374 aaKnown RBP16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 SLC16A11Q8NCK7 471 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 GALNT6Q8NCL4 622 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 CATSPER1Q8NEC5 780 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 OR52R1Q8NGF1 315 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 FKBP10Q96AY3 582 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 TMEM19Q96HH6 336 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 TAAR9Q96RI9 348 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 KLHL4Q9C0H6 718 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 SOX17Q9H6I2 414 aaPredicted RBP16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 PNO1Q9NRX1 252 aaKnown RBP16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 ZNF451Q9Y4E5 1061 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 CFAP54Q96N23 3096 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 SDK2Q58EX2 2172 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 A8MUA0 341 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 CLPSP04118 112 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 BCHEP06276 602 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 JMJD7P0C870 316 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 ACP2P11117 423 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 AGXTP21549 392 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 PCBP3P57721 371 aaKnown RBP16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 FUT7Q11130 342 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 SYPL1Q16563 259 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 MLIPQ5VWP3 458 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 FAM198BQ6UWH4 519 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 LANCL3Q6ZV70 420 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 METTL25Q8N6Q8 603 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms