RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 A0A1W2PRQ8 180 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 ZNF860A6NHJ4 632 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 FARS2O95363 451 aaKnown RBP13.36□□□□□ -0.27
SREBF1-202ENST00000355815 RB1P06400 928 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 C1SP09871 688 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 RGS6P49758 472 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 NCBP2P52298 156 aaKnown RBP eCLIP13.36□□□□□ -0.279e-10■■■■□ 20.4
SREBF1-202ENST00000355815 OC90Q02509 493 aaPredicted RBP13.36□□□□□ -0.27
SREBF1-202ENST00000355815 FGL2Q14314 439 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 PROX2Q3B8N5 592 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 TCEAL5Q5H9L2 206 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 PAQR7Q86WK9 346 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 RASGEF1AQ8N9B8 481 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 ADAMTS16Q8TE57 1224 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 ASB11Q8WXH4 323 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 EFCAB11Q9BUY7 163 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 B3GNT4Q9C0J1 378 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 PIGUQ9H490 435 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 INSL6Q9Y581 213 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 A0A1B0GV50 99 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 ASPDHA6ND91 283 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 HMX3A6NHT5 357 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 J3KTA2 159 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 HIST1H2ABP04908 130 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 ALDOBP05062 364 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 AMD1P17707 334 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 ADH7P40394 386 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 SMSP52788 366 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 GNA13Q14344 377 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 PLEKHS1Q5SXH7 462 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 ZNF783Q6ZMS7 281 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 HIST3H2AQ7L7L0 130 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 ZNF557Q8N988 423 aaPredicted RBP13.36□□□□□ -0.27
SREBF1-202ENST00000355815 OR2A12Q8NGT7 310 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 HIST1H2ACQ93077 130 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 TM9SF2Q99805 663 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 KXD1Q9BQD3 176 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 OR51I1Q9H343 314 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 PCDHB11Q9Y5F2 797 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 IGLON5A6NGN9 336 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 H3BNC9 293 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 CAPN5O15484 640 aaPredicted RBP13.36□□□□□ -0.27
SREBF1-202ENST00000355815 OR10H2O60403 315 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 H2AFB2P0C5Z0 115 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 PIM1P11309 404 aaPredicted RBP13.36□□□□□ -0.27
SREBF1-202ENST00000355815 TIAL1Q01085 375 aaKnown RBP eCLIP13.36□□□□□ -0.27
SREBF1-202ENST00000355815 RGS1Q08116 209 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 SELENBP1Q13228 472 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 LHX8Q68G74 356 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 B3GNT7Q8NFL0 401 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 SLC35G5Q96KT7 338 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 RHNO1Q9BSD3 238 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 ABCD2Q9UBJ2 740 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 ZNF780BQ9Y6R6 833 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 HRGP04196 525 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 ZNF30P17039 623 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 EPHA2P29317 976 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 TIA1P31483 386 aaKnown RBP eCLIP13.36□□□□□ -0.272e-8■■■□□ 15.4
SREBF1-202ENST00000355815 CRISP1P54107 249 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 GPR19Q15760 415 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 OR4E2Q8NGC2 313 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 NEDD4LQ96PU5 975 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 CTRCQ99895 268 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 REEP4Q9H6H4 257 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 C3orf14Q9HBI5 128 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 PCDHB16Q9NRJ7 776 aa13.36□□□□□ -0.27
SREBF1-202ENST00000355815 MBD1Q9UIS9 605 aaPredicted RBP13.36□□□□□ -0.27
SREBF1-202ENST00000355815 NFATC1O95644 943 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 CD3GP09693 182 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 ZDHHC11BP0C7U3 371 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 PSMA3P25788 255 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 APEX1P27695 318 aaKnown RBP13.35□□□□□ -0.27
SREBF1-202ENST00000355815 PSMB5P28074 263 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 PYCR1P32322 319 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 TGM4P49221 684 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 SUOXP51687 545 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 PITPNAQ00169 270 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 XKR7Q5GH72 579 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 KLHL24Q6TFL4 600 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 ST8SIA2Q92186 375 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 CNDP2Q96KP4 475 aaKnown RBP13.35□□□□□ -0.27
SREBF1-202ENST00000355815 ZSWIM3Q96MP5 696 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 OR6C2Q9NZP2 312 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 POLHQ9Y253 713 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 PCDHGA6Q9Y5G7 932 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 FAM227AF5H4B4 570 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 C6P13671 934 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 EDNRAP25101 427 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 PPP3R1P63098 170 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 SPIN4Q56A73 249 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 KHDRBS2Q5VWX1 349 aaKnown RBP13.35□□□□□ -0.27
SREBF1-202ENST00000355815 CELF5Q8N6W0 485 aaKnown RBP13.35□□□□□ -0.27
SREBF1-202ENST00000355815 NTMT1Q9BV86 223 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 ZNF350Q9GZX5 532 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 P2RY12Q9H244 342 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 CLMPQ9H6B4 373 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 FAM186AA6NE01 2351 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 ARNTLO00327 626 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 C1GALT1C1LP0DN25 315 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 ZNF14P17017 642 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms