RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 POU2F3Q9UKI9 436 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 NME7Q9Y5B8 376 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 A8MU76 341 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 MAS1P04201 325 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 ETFAP13804 333 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 SELPP16109 830 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 PCGF2P35227 344 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 MLLT11Q13015 90 aaPredicted RBP12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 GPR157Q5UAW9 335 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 BEND4Q6ZU67 534 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 LACC1Q8IV20 430 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 FCRL1Q96LA6 429 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 GSTO2Q9H4Y5 243 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 ANHXE9PGG2 379 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF16P17020 682 aaPredicted RBP12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 TMEM150AQ86TG1 271 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 NPAS4Q8IUM7 802 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 WDTC1Q8N5D0 677 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 NUP43Q8NFH3 380 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 TRAV18A0A075B6X5 111 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 PPP3CBP16298 524 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 SSTR2P30874 369 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 RIDAP52758 137 aaKnown RBP12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 ERVK-21P61565 698 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 ARL6IP1Q15041 203 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 TPGS2Q68CL5 300 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 SERPINA11Q86U17 422 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 ALG8Q9BVK2 526 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF225Q9UK10 706 aa12.12□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZCWPW2A0A1B0GU75 182 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 RAB19A4D1S5 217 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 MEGF11A6BM72 1044 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 GRXCR1A8MXD5 290 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 ACRV1P26436 265 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 RBMS1P29558 406 aaKnown RBP12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 MAGEA3P43357 314 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 RAB8AP61006 207 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 DHCR24Q15392 516 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 HES5Q5TA89 166 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 OSTM1Q86WC4 334 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 UMODL1-AS1Q8N2C9 162 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR13C3Q8NGS6 347 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 MAN2C1Q9NTJ4 1040 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 ATG4BQ9Y4P1 393 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 C7orf72A4D263 438 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 HPGDSO60760 199 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 RAB3DO95716 219 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 BDKRB2P30411 391 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 TDGQ13569 410 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 RGNQ15493 299 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 RGMBQ6NW40 437 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 PLBD1Q6P4A8 553 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 SPRED1Q7Z699 444 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 C7orf61Q8IZ16 206 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR5H2Q8NGV7 314 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR5W2Q8NH69 310 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 JSRP1Q96MG2 331 aaPredicted RBP12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLC38A3Q99624 504 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 SYT3Q9BQG1 590 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 G6PC3Q9BUM1 346 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 ANKRD34BA5PLL1 514 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 AK1P00568 194 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 SSTP61278 116 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR9Q2Q8NGE9 314 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 WDR20Q8TBZ3 569 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 BRIX1Q8TDN6 353 aaKnown RBP12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 LIN37Q96GY3 246 aaPredicted RBP12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 KLHL15Q96M94 604 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF300Q96RE9 604 aaPredicted RBP12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 C17orf62Q9BQA9 187 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 PELOQ9BRX2 385 aaKnown RBP12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLC6A5Q9Y345 797 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 PCDHGA2Q9Y5H1 932 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 A0A0A6YYH2 397 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 A0A0D9SG52 128 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 A6NJ64 397 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 PRKCAP17252 672 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 GIFP27352 417 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 PBX2P40425 430 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLC26A5P58743 744 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 ERVPABLB-1P60509 514 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 BATFQ16520 125 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 STEAP3Q658P3 488 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 RFPL4BQ6ZWI9 263 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 LAS2Q8IYD9 372 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 DNAJC22Q8N4W6 341 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 PLA2G15Q8NCC3 412 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZBED3Q96IU2 234 aaPredicted RBP12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 DIRAS3O95661 229 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 DRD2P14416 443 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 MLLT3P42568 568 aaPredicted RBP12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 GPR4P46093 362 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 CCDC116Q8IYX3 515 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 SMAP2Q8WU79 429 aaPredicted RBP12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 FUBP1Q96AE4 644 aaKnown RBP12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 NTN4Q9HB63 628 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 TUBG2Q9NRH3 451 aa12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 MARCH4Q9P2E8 410 aaPredicted RBP12.11□□□□□ -0.47
SYNCRIP-201ENST00000355238 ALX3O95076 343 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 DCNP07585 359 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms