RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 RDH16O75452 317 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 PDGFBP01127 241 aaPredicted RBP16.11■□□□□ 0.17
VPS13B-201ENST00000355155 LINGO3P0C6S8 592 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 S1PR1P21453 382 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 ZNF528Q3MIS6 628 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 C1orf210Q8IVY1 113 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 OR9A4Q8NGU2 314 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 XAGE5Q8WWM1 108 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 PROX1Q92786 737 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 TGM7Q96PF1 710 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 KIF1CO43896 1103 aaKnown RBP16.1■□□□□ 0.17
VPS13B-201ENST00000355155 HSD17B7P56937 341 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 SMIM11AP58511 58 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 OLR1P78380 273 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 TSSK4Q6SA08 328 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 CDRT4Q8N9R6 151 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 POLR2J2Q9GZM3 115 aaKnown RBP16.1■□□□□ 0.17
VPS13B-201ENST00000355155 POLR2J3Q9H1A7 115 aaKnown RBP16.1■□□□□ 0.17
VPS13B-201ENST00000355155 KCNE3Q9Y6H6 103 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 SMIM31A0A1B0GVY4 71 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 SYNDIG1LA6NDD5 238 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 FFAR1O14842 300 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 HS6ST1O60243 411 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 THBS1P07996 1170 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 ACP2P11117 423 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 CBLP22681 906 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 CSF2RBP32927 897 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 PIGAP37287 484 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 AVPR1BP47901 424 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 OR1D5P58170 312 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 GABARAPL2P60520 117 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 ISL1P61371 349 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 TOP3AQ13472 1001 aaPredicted RBP16.1■□□□□ 0.17
VPS13B-201ENST00000355155 DEFB110Q30KQ9 67 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 TCTN3Q6NUS6 607 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 C8orf59Q8N0T1 100 aaPredicted RBP16.1■□□□□ 0.17
VPS13B-201ENST00000355155 ZNF350Q9GZX5 532 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 CAPN10Q9HC96 672 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 TRPC4Q9UBN4 977 aa16.1■□□□□ 0.17
VPS13B-201ENST00000355155 MRPS33Q9Y291 106 aaKnown RBP16.1■□□□□ 0.17
VPS13B-201ENST00000355155 CXCR4P61073 352 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 ATAD3BQ5T9A4 648 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 ANKRD34AQ69YU3 496 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 LINC00471Q8N535 108 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 CEP76Q8TAP6 659 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 KAT2AQ92830 837 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 MUS81Q96NY9 551 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 COL21A1Q96P44 957 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 SEC14L3Q9UDX4 400 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 IFT52Q9Y366 437 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 MMACHCQ9Y4U1 282 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 ABCA7Q8IZY2 2146 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 ZNF860A6NHJ4 632 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 COQ9O75208 318 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 SEMA7AO75326 666 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 DIRAS1O95057 198 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 NKX2-2O95096 273 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 PRKACGP22612 351 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 NR1H2P55055 460 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 COLEC12Q5KU26 742 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 FRRS1Q6ZNA5 592 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 SMYD1Q8NB12 490 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 TSPAN14Q8NG11 270 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 OR4D11Q8NGI4 311 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 OIT3Q8WWZ8 545 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 OR1F2PQ96R84 312 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 ANKRD19PQ9H560 264 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 STARD5Q9NSY2 213 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 POFUT2Q9Y2G5 429 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 ZIC2O95409 532 aaPredicted RBP16.09■□□□□ 0.17
VPS13B-201ENST00000355155 ALPPL2P10696 532 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 NELFEP18615 380 aaKnown RBP16.09■□□□□ 0.17
VPS13B-201ENST00000355155 DHPSP49366 369 aaPredicted RBP16.09■□□□□ 0.17
VPS13B-201ENST00000355155 HLCSP50747 726 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 NR0B2Q15466 257 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 LIN52Q52LA3 116 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 SETD9Q8NE22 299 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 ADAMTS15Q8TE58 950 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 NCSTNQ92542 709 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 MTHFD2LQ9H903 347 aaPredicted RBP16.09■□□□□ 0.17
VPS13B-201ENST00000355155 ENOPH1Q9UHY7 261 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 A4GNTQ9UNA3 340 aa16.09■□□□□ 0.17
VPS13B-201ENST00000355155 A0A1W2PRQ8 180 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 CBX7O95931 251 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 CLPTM1O96005 669 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 STT3AP46977 705 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 OR1E2P47887 323 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 CLK3P49761 638 aaKnown RBP16.08■□□□□ 0.16
VPS13B-201ENST00000355155 DUSP8Q13202 625 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 DGCR6Q14129 220 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 TTC33Q6PID6 262 aaPredicted RBP16.08■□□□□ 0.16
VPS13B-201ENST00000355155 CD300LDQ6UXZ3 194 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 OR10G2Q8NGC3 310 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 HRASLS5Q96KN8 279 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 CXorf21Q9HAI6 301 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 HCN4Q9Y3Q4 1203 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 FAM32AQ9Y421 112 aaKnown RBP16.08■□□□□ 0.16
VPS13B-201ENST00000355155 U3KQV3 271 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 A0A087WXM4 84 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 A0A0A6YYC8 382 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms