RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 KATNBL1Q9H079 304 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 TMPRSS11EQ9UL52 423 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 GPR52Q9Y2T5 361 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 XRN1Q8IZH2 1706 aaKnown RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 A8MVJ9 347 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 RGS9O75916 674 aaPredicted RBP12.56□□□□□ -0.4
SCN8A-202ENST00000355133 PROZP22891 400 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 P2RY2P41231 377 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 CLDN2P57739 230 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 UBE2NP61088 152 aaKnown RBP12.56□□□□□ -0.4
SCN8A-202ENST00000355133 MORN1Q5T089 497 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 ISCA2Q86U28 154 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 MINDY1Q8N5J2 469 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 CIDECQ96AQ7 238 aaPredicted RBP12.56□□□□□ -0.4
SCN8A-202ENST00000355133 IGSF5Q9NSI5 407 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 RDH8Q9NYR8 311 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 TMEM9Q9P0T7 183 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 ICKQ9UPZ9 632 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 OXSR1O95747 527 aaPredicted RBP12.56□□□□□ -0.4
SCN8A-202ENST00000355133 FESP07332 822 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 ZNF888P0CJ79 500 aaPredicted RBP12.56□□□□□ -0.4
SCN8A-202ENST00000355133 GSTM2P28161 218 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 CLCN2P51788 898 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 ZNF252P-AS1Q0IIN9 211 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.56□□□□□ -0.4
SCN8A-202ENST00000355133 PLBD1Q6P4A8 553 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 SCD5Q86SK9 330 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 NRMQ8IXM6 262 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 PRR22Q8IZ63 422 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 ADAMTS18Q8TE60 1221 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 SLC41A3Q96GZ6 507 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 SLC45A3Q96JT2 553 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 NELL2Q99435 816 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 INPP5KQ9BT40 448 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 SLC12A9Q9BXP2 914 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 TMEM185BQ9H7F4 350 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 KCNN3Q9UGI6 736 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 I3L521 148 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 IRF2P14316 349 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 RPS3P23396 243 aaKnown RBP eCLIP12.56□□□□□ -0.4
SCN8A-202ENST00000355133 RCAN2Q14206 197 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 MLC1Q15049 377 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 PM20D1Q6GTS8 502 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 DUS1LQ6P1R4 473 aaKnown RBP12.56□□□□□ -0.4
SCN8A-202ENST00000355133 Q6ZSR6 202 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 OR6Q1Q8NGQ2 317 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 ACTRT3Q9BYD9 372 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 ISPDA4D126 451 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 H7C417 338 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 ACTA2P62736 377 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 ACTG2P63267 376 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 PIGGQ5H8A4 983 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 FAM205BPQ63HN1 556 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 GRHL2Q6ISB3 625 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 MAMDC2Q7Z304 686 aaPredicted RBP12.56□□□□□ -0.4
SCN8A-202ENST00000355133 TEX26Q8N6G2 289 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 IL17RCQ8NAC3 791 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 SCGB1C1Q8TD33 95 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 FIZ1Q96SL8 496 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 APOOQ9BUR5 198 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 HDHD5Q9BXW7 423 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 MMP27Q9H306 513 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 FAM118AQ9NWS6 357 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 A0A0G2JPF8 293 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 CLCA1A8K7I4 914 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 HNRNPCL3B7ZW38 293 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 ACOT7O00154 380 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 PRAMEF2O60811 474 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 CNOT4O95628 575 aaKnown RBP12.56□□□□□ -0.4
SCN8A-202ENST00000355133 GNAO1P09471 354 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 GKN3PP0CG01 181 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 HNRNPCL4P0DMR1 293 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 UGT2B10P36537 528 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 BTBD16Q32M84 506 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 ZNF789Q5FWF6 425 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 ALOXE3Q9BYJ1 711 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 PELI2Q9HAT8 420 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 CD207Q9UJ71 328 aa12.56□□□□□ -0.4
SCN8A-202ENST00000355133 A6NL46 340 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 SMAD6O43541 496 aaKnown RBP12.55□□□□□ -0.4
SCN8A-202ENST00000355133 KIAA0513O60268 411 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 CTXN1P60606 82 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 BCL2L15Q5TBC7 163 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 IQCF1Q8N6M8 205 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 MFSD8Q8NHS3 518 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 RHBDD1Q8TEB9 315 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 MGLLQ99685 303 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 PAK1IP1Q9NWT1 392 aaPredicted RBP12.55□□□□□ -0.4
SCN8A-202ENST00000355133 REV1Q9UBZ9 1251 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 RPH3AQ9Y2J0 694 aaPredicted RBP12.55□□□□□ -0.4
SCN8A-202ENST00000355133 RNF215Q9Y6U7 377 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 GGT1P19440 569 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 SFTPDP35247 375 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 GJA8P48165 433 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 RAB15P59190 212 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 MAP4K2Q12851 820 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 MOGSQ13724 837 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 DCDC5Q6ZRR9 648 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 OR52N2Q8NGI0 321 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 TRMT10AQ8TBZ6 339 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms