RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 C3orf38Q5JPI3 329 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 ZBTB37Q5TC79 503 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 IL34Q6ZMJ4 242 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 BPHLQ86WA6 291 aaPredicted RBP12.05□□□□□ -0.48
COL6A3-203ENST00000353578 LRR1Q96L50 414 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 BCO1Q9HAY6 547 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 RIMS3Q9UJD0 308 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 NPIPA5E9PKD4 350 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 INSIG1O15503 277 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 ZNF623O75123 536 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 FAM163BP0C2L3 166 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 PDZK1IP1Q13113 114 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 PGLYRP2Q96PD5 576 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 FN3KRPQ9HA64 309 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 NCDNQ9UBB6 729 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 NPIPA1Q9UND3 350 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 PCDHGA2Q9Y5H1 932 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 PMS2P2O95744 297 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 HRH2P25021 359 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 HOXD13P35453 343 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 GINS1Q14691 196 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 STEAP3Q658P3 488 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 UNQ6126/PRO20091Q6UXV3 157 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 OR10Z1Q8NGY1 313 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 TTC9Q92623 222 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 PPP5D1E7EU14 171 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 SRPX2O60687 465 aaPredicted RBP12.05□□□□□ -0.48
COL6A3-203ENST00000353578 SULT1A2P50226 295 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 FKBP1AP62942 108 aaKnown RBP12.05□□□□□ -0.48
COL6A3-203ENST00000353578 MFGE8Q08431 387 aaPredicted RBP12.05□□□□□ -0.48
COL6A3-203ENST00000353578 ZNF704Q6ZNC4 412 aaPredicted RBP12.05□□□□□ -0.48
COL6A3-203ENST00000353578 GPR142Q7Z601 462 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 IFNLR1Q8IU57 520 aaPredicted RBP12.05□□□□□ -0.48
COL6A3-203ENST00000353578 ZNF75AQ96N20 296 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 SERINC1Q9NRX5 453 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 MANBAO00462 879 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 GABARAPO95166 117 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 OR5B17Q8NGF7 314 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 G6PC3Q9BUM1 346 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 LMAN1LQ9HAT1 526 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 SDR39U1Q9NRG7 319 aaPredicted RBP12.05□□□□□ -0.48
COL6A3-203ENST00000353578 MYEF2Q9P2K5 600 aaKnown RBP12.05□□□□□ -0.48
COL6A3-203ENST00000353578 PCDHB9Q9Y5E1 797 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 CBY3A6NI87 242 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 SLC16A5O15375 505 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 ARNTL2Q8WYA1 636 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 SYT7O43581 403 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 CHRNEQ04844 493 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 OR4M1Q8NGD0 313 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 ACTL8Q9H568 366 aa12.05□□□□□ -0.48
COL6A3-203ENST00000353578 PHPT1Q9NRX4 125 aaPredicted RBP12.05□□□□□ -0.48
COL6A3-203ENST00000353578 FAM186AA6NE01 2351 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 GPRIN2O60269 458 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 HTR2CP28335 458 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 C2orf76Q3KRA6 126 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 STEAP4Q687X5 459 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 P4HA3Q7Z4N8 544 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 EPHA6Q9UF33 1036 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 UBE2J1Q9Y385 318 aaPredicted RBP12.04□□□□□ -0.48
COL6A3-203ENST00000353578 PXDNQ92626 1479 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 RAD1O60671 282 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 OSMP13725 252 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 BACE1P56817 501 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 OR52H1Q8NGJ2 320 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 IL31RAQ8NI17 732 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 ST7LQ8TDW4 575 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 HPSE2Q8WWQ2 592 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 THAP4Q8WY91 577 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 BORCS8Q96FH0 119 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 NOX3Q9HBY0 568 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 ADAP2Q9NPF8 381 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 ZCCHC3Q9NUD5 404 aaKnown RBP12.04□□□□□ -0.48
COL6A3-203ENST00000353578 C1orf123Q9NWV4 160 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 RAI2Q9Y5P3 530 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 TGFB1I1O43294 461 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 PIAS1O75925 651 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 SLC39A12Q504Y0 691 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 RNF180Q86T96 592 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 SERPINA12Q8IW75 414 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 ARMC5Q96C12 935 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 MMP28Q9H239 520 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 VAPAQ9P0L0 249 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 TRAV20A0A0B4J274 112 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 ANKRD63C9JTQ0 380 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 IRF5Q13568 498 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 TNFAIP8L2Q6P589 184 aaPredicted RBP12.04□□□□□ -0.48
COL6A3-203ENST00000353578 NRCAMQ92823 1304 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 RECQL4O94761 1208 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 SLC6A9P48067 706 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 FABP6P51161 128 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 SLC7A9P82251 487 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 WDR88Q6ZMY6 472 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 L3HYPDHQ96EM0 354 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 SENP8Q96LD8 212 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 SCDO00767 359 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 CIDEAO60543 219 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 GIFP27352 417 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 PCGF2P35227 344 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 MEOX2P50222 304 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 MC1RQ01726 317 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms