RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 DHCR24Q15392 516 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 CRTC2Q53ET0 693 aaPredicted RBP23.11■■□□□ 1.29
CPNE1-202ENST00000352393 PYDC2Q56P42 97 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 GATAD2BQ8WXI9 593 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 ZSWIM3Q96MP5 696 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 TM9SF2Q99805 663 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 SPATA5L1Q9BVQ7 753 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 PITHD1Q9GZP4 211 aaPredicted RBP23.11■■□□□ 1.29
CPNE1-202ENST00000352393 SLC23A2Q9UGH3 650 aa23.11■■□□□ 1.29
CPNE1-202ENST00000352393 NUFIP1Q9UHK0 495 aaKnown RBP23.11■■□□□ 1.29
CPNE1-202ENST00000352393 HEATR5BQ9P2D3 2071 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 SMIM30A4D0T7 59 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 UBXN7O94888 489 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 HLA-DQB1P01920 261 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 KIR2DL3P43628 341 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 HOXC5Q00444 222 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 FABP5Q01469 135 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.1■■□□□ 1.29
CPNE1-202ENST00000352393 HMGN2P46Q86SG4 172 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 AMZ2Q86W34 360 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 ZNF485Q8NCK3 441 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 TMIEQ8NEW7 156 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 OR8D4Q8NGM9 314 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 TEX47Q8TBZ9 253 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 OTUB1Q96FW1 271 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-202ENST00000352393 FRMD6Q96NE9 622 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 TOX2Q96NM4 488 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 TMEM246Q9BRR3 403 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 DPH7Q9BTV6 452 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 PCBD2Q9H0N5 130 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 RANGRFQ9HD47 186 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-202ENST00000352393 TOR4AQ9NXH8 423 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 BOLA1Q9Y3E2 137 aa23.1■■□□□ 1.29
CPNE1-202ENST00000352393 KDM4EB2RXH2 506 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-202ENST00000352393 LINC00271P0C7V0 271 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 LIMS3P0CW19 117 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 LIMS4P0CW20 117 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 HSD17B2P37059 387 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 SLC6A11P48066 632 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 PRMT2P55345 433 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 TCEAL5Q5H9L2 206 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 SUN3Q8TAQ9 357 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 COX14Q96I36 57 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 SAP130Q9H0E3 1048 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 CTPS2Q9NRF8 586 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 PLSCR3Q9NRY6 295 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 PAQR5Q9NXK6 330 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-202ENST00000352393 SNTNA6NMZ2 147 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 KIAA0355O15063 1070 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 CASC3O15234 703 aaKnown RBP23.09■■□□□ 1.29
CPNE1-202ENST00000352393 DRD2P14416 443 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 SSTR4P31391 388 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 MTNR1AP48039 350 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 PPP3R1P63098 170 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 NDUFAF5Q5TEU4 345 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 SLC27A4Q6P1M0 643 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 ERN2Q76MJ5 926 aaKnown RBP23.09■■□□□ 1.29
CPNE1-202ENST00000352393 VASH1Q7L8A9 365 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-202ENST00000352393 NOXA1Q86UR1 476 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 CAMKK1Q8N5S9 505 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 PLA2G15Q8NCC3 412 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 NXPE3Q969Y0 559 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 FYTTD1Q96QD9 318 aaKnown RBP23.09■■□□□ 1.29
CPNE1-202ENST00000352393 ARHGAP9Q9BRR9 750 aa23.09■■□□□ 1.29
CPNE1-202ENST00000352393 PAK6Q9NQU5 681 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-202ENST00000352393 NDRG2Q9UN36 371 aaKnown RBP23.09■■□□□ 1.29
CPNE1-202ENST00000352393 A0A087WUU8 490 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 A0A0G2JN53 185 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 OR1F1O43749 312 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 CD79BP40259 229 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 ARHGEF6Q15052 776 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 GPR19Q15760 415 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 TMEM52BQ4KMG9 183 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 C9orf64Q5T6V5 341 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 OR4C11Q6IEV9 310 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 TMEM64Q6YI46 380 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 MEX3DQ86XN8 651 aaKnown RBP23.08■■□□□ 1.29
CPNE1-202ENST00000352393 ATP6V1C2Q8NEY4 427 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 SLC9A6Q92581 669 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 SOSTQ9BQB4 213 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 AICDAQ9GZX7 198 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 SLC35C2Q9NQQ7 365 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 GSTK1Q9Y2Q3 226 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 GPR52Q9Y2T5 361 aa23.08■■□□□ 1.29
CPNE1-202ENST00000352393 PPM1DO15297 605 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 HCN1O60741 890 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 GUCY1B2O75343 617 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 FGBP02675 491 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 CSF2P04141 144 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 RPN2P04844 631 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 YES1P07947 543 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 ADH5P11766 374 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 BUD31P41223 144 aaPredicted RBP23.08■■□□□ 1.28
CPNE1-202ENST00000352393 NCBP2P52298 156 aaKnown RBP eCLIP23.08■■□□□ 1.289e-8■□□□□ 9.8
CPNE1-202ENST00000352393 NTHL1P78549 312 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 MESP2Q0VG99 397 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 UAP1L1Q3KQV9 507 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 LCN1P1Q5VSP4 162 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 FAM46CQ5VWP2 391 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 ANKK1Q8NFD2 765 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms