RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 PPICP45877 212 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 DCAF7P61962 342 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 EMX2Q04743 252 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 PTGR1Q14914 329 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 IL23RQ5VWK5 629 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 ANKRD26P1Q6NSI1 321 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 TRIM42Q8IWZ5 723 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 FAM26EQ8N5C1 309 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 PPCDCQ96CD2 204 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 HSPBAP1Q96EW2 488 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 LCORQ96JN0 433 aaPredicted RBP20.35■□□□□ 0.85
SNX3-202ENST00000349379 VSTM2LQ96N03 204 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 SACM1LQ9NTJ5 587 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 ATP6V1HQ9UI12 483 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 GPR55Q9Y2T6 319 aaPredicted RBP20.35■□□□□ 0.85
SNX3-202ENST00000349379 USP9XQ93008 2570 aaPredicted RBP20.34■□□□□ 0.85
SNX3-202ENST00000349379 KLF11O14901 512 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 TO15178 435 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 ACOX3O15254 700 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 PDPK1O15530 556 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 NAGAP17050 411 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 ABCD3P28288 659 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 C21orf58P58505 322 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 OCRLQ01968 901 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 KRTCAP3Q53RY4 240 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 SLC22A10Q63ZE4 541 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 ATG16L1Q676U5 607 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 TMEM64Q6YI46 380 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 R3HCC1LQ7Z5L2 792 aaKnown RBP20.34■□□□□ 0.85
SNX3-202ENST00000349379 LRRC34Q8IZ02 419 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 FBXW8Q8N3Y1 598 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 OR10G3Q8NGC4 313 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 PRR7Q8TB68 274 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 CIDECQ96AQ7 238 aaPredicted RBP20.34■□□□□ 0.85
SNX3-202ENST00000349379 BTBD9Q96Q07 612 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 FAM173AQ9BQD7 235 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 MANSC1Q9H8J5 431 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 AKTIPQ9H8T0 292 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 MEAF6Q9HAF1 191 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 PROK2Q9HC23 129 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 SEC14L3Q9UDX4 400 aa20.34■□□□□ 0.85
SNX3-202ENST00000349379 CNOT11Q9UKZ1 510 aaKnown RBP20.34■□□□□ 0.85
SNX3-202ENST00000349379 C19orf53Q9UNZ5 99 aaPredicted RBP20.34■□□□□ 0.85
SNX3-202ENST00000349379 DIDO1Q9BTC0 2240 aaKnown RBP20.33■□□□□ 0.85
SNX3-202ENST00000349379 FRG2CA6NGY1 282 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 CAPN14A8MX76 684 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 SCAMP2O15127 329 aaKnown RBP20.33■□□□□ 0.85
SNX3-202ENST00000349379 GLSO94925 669 aaPredicted RBP20.33■□□□□ 0.85
SNX3-202ENST00000349379 UNC5CO95185 931 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 P04436 131 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 CT45A8P0DMV1 189 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 CT45A9P0DMV2 189 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 RPL3P39023 403 aaKnown RBP20.33■□□□□ 0.85
SNX3-202ENST00000349379 MC3RP41968 323 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 TMED10P49755 219 aaKnown RBP20.33■□□□□ 0.85
SNX3-202ENST00000349379 NRG3P56975 720 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 KCNK10P57789 538 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 FOXO1Q12778 655 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 MAD2L1Q13257 205 aaPredicted RBP20.33■□□□□ 0.85
SNX3-202ENST00000349379 UBAP2LQ14157 1087 aaKnown RBP20.33■□□□□ 0.85
SNX3-202ENST00000349379 RPS6KA2Q15349 733 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 CT45A2Q5DJT8 189 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 TMEM107Q6UX40 140 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 GFRALQ6UXV0 394 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 BNC2Q6ZN30 1099 aaPredicted RBP20.33■□□□□ 0.85
SNX3-202ENST00000349379 RIMKLAQ8IXN7 391 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 OR2L13Q8N349 312 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 NTNG2Q96CW9 530 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 ELP4Q96EB1 424 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 SECISBP2Q96T21 854 aaKnown RBP20.33■□□□□ 0.85
SNX3-202ENST00000349379 NUF2Q9BZD4 464 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 FOLH1BQ9HBA9 442 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 ACSS1Q9NUB1 689 aaPredicted RBP20.33■□□□□ 0.85
SNX3-202ENST00000349379 CNIH4Q9P003 139 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 SH3BP4Q9P0V3 963 aa20.33■□□□□ 0.85
SNX3-202ENST00000349379 MYO7BQ6PIF6 2116 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 NPIPA5E9PKD4 350 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 UPK1AO00322 258 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 ASNA1O43681 348 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 COQ9O75208 318 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 NME6O75414 186 aaPredicted RBP20.32■□□□□ 0.84
SNX3-202ENST00000349379 SASH3O75995 380 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 ZIC2O95409 532 aaPredicted RBP20.32■□□□□ 0.84
SNX3-202ENST00000349379 STSP08842 583 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 HPCAL1P37235 193 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 RFC3P40938 356 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 NNATQ16517 81 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 HYAL4Q2M3T9 481 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 GK5Q6ZS86 529 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 FAM47EQ6ZV65 393 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 ZNF551Q7Z340 670 aaPredicted RBP20.32■□□□□ 0.84
SNX3-202ENST00000349379 PRR22Q8IZ63 422 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 FAM13CQ8NE31 585 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 SPPL2AQ8TCT8 520 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 ZBED6CLQ96FA7 236 aaPredicted RBP20.32■□□□□ 0.84
SNX3-202ENST00000349379 PPP1R36Q96LQ0 422 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 TSPAN10Q9H1Z9 355 aaPredicted RBP20.32■□□□□ 0.84
SNX3-202ENST00000349379 TAS2R9Q9NYW1 312 aa20.32■□□□□ 0.84
SNX3-202ENST00000349379 NOP53Q9NZM5 478 aaKnown RBP20.32■□□□□ 0.84
SNX3-202ENST00000349379 NPIPA1Q9UND3 350 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms