RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 POM121BA6NF01 834 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 CDC42EP2O14613 210 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF197O14709 1029 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 TPPPO94811 219 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 CA3P07451 260 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 PRG2P13727 222 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ALOX12P18054 663 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 PPIBP23284 216 aaKnown RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 DDX6P26196 483 aaKnown RBP eCLIP5.68□□□□□ -1.58e-7■□□□□ 11.2
CLCN3-201ENST00000347613 NCBP2P52298 156 aaKnown RBP eCLIP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 FXYD6P3P58550 94 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ST8SIA6P61647 398 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 RPS25P62851 125 aaKnown RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 OLR1P78380 273 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 C9orf50Q5SZB4 431 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SLX4IPQ5VYV7 408 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 WDR88Q6ZMY6 472 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 NCCRP1Q6ZVX7 275 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 USP43Q70EL4 1123 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ADCK2Q7Z695 626 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 NRARPQ7Z6K4 114 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 DCUN1D3Q8IWE4 304 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 PHC2Q8IXK0 858 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 NANOGP1Q8N7R0 232 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 DTX3Q8N9I9 347 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 TMEM145Q8NBT3 493 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 OR52E1Q8NGJ3 308 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SETD7Q8WTS6 366 aaKnown RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 OR8D1Q8WZ84 308 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SMG7Q92540 1137 aaKnown RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SENP5Q96HI0 755 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 MAPKAP1Q9BPZ7 522 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 TSSK6Q9BXA6 273 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 TEX101Q9BY14 249 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 MMP27Q9H306 513 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SEMA3GQ9NS98 782 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 IMPAD1Q9NX62 359 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 KCNE5Q9UJ90 142 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 CORO2BQ9UQ03 480 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 LIPT1Q9Y234 373 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SF3B6Q9Y3B4 125 aaKnown RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 TDRD6O60522 2096 aaKnown RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 BRWD1Q9NSI6 2320 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 TICRRQ7Z2Z1 1910 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ADAM11O75078 769 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SEMA3DO95025 777 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 PCDH8O95206 1070 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 AIFM1O95831 613 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 GNALP38405 381 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 MC3RP41968 323 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 XKP51811 444 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 PPP2CBP62714 309 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 PPP2CAP67775 309 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ZIC1Q15915 447 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 CCNJQ5T5M9 372 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 HIST2H2AA3Q6FI13 130 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 LILRB2Q8N423 598 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF485Q8NCK3 441 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 TMEM52Q8NDY8 209 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 FAM46DQ8NEK8 389 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 OR4K5Q8NGD3 323 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 OR4Q3Q8NH05 313 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 CHAC2Q8WUX2 184 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 OR5P2Q8WZ92 322 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 PPP1R14BQ96C90 147 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 REPS1Q96D71 796 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 MAGEB10Q96LZ2 347 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF582Q96NG8 517 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 CAMK1GQ96NX5 476 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 KXD1Q9BQD3 176 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 BCL7BQ9BQE9 202 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 HCAR1Q9BXC0 346 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ASPNQ9BXN1 380 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SLC38A1Q9H2H9 487 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 TIGARQ9NQ88 270 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 EHD3Q9NZN3 535 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SPATA7Q9P0W8 599 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 TRPC4Q9UBN4 977 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SIRT4Q9Y6E7 314 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 NPIPA5A0A0B4J1W7 369 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 CPSF4LA6NMK7 179 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ISM1B1AKI9 464 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 NPIPA7E9PJI5 369 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 QSOX1O00391 747 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 GPR37O15354 613 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 P2RX6O15547 441 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 SCG5P05408 212 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 H1F0P07305 194 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 GSTT2P0CG29 244 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 GSTT2BP0CG30 244 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 NPIPA8P0DM63 369 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 COL9A1P20849 921 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 KELP23276 732 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 GRK3P35626 688 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 TRIM23P36406 574 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 CCR8P51685 355 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 PDX1P52945 283 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 PRMT2P55345 433 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 CDK5Q00535 292 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ID2Q02363 134 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms