RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 MEN1O00255 615 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 ZNF28P17035 718 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 GCH1P30793 250 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 ABHD12BQ7Z5M8 362 aaPredicted RBP21.99■■□□□ 1.11
NPAS3-201ENST00000346562 KLBQ86Z14 1044 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 C22orf15Q8WYQ4 148 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 PCYT2Q99447 389 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 PAPOLGQ9BWT3 736 aaKnown RBP21.99■■□□□ 1.11
NPAS3-201ENST00000346562 ZNF181Q2M3W8 571 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 RBM12BQ8IXT5 1001 aaKnown RBP21.98■■□□□ 1.11
NPAS3-201ENST00000346562 OR6C4Q8NGE1 309 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 OR9A4Q8NGU2 314 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 C16orf78Q8WTQ4 265 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 SORCS1Q8WY21 1168 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 OR5B12Q96R08 314 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 RGCCQ9H4X1 137 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 A0A1W2PPK0 400 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 CD8B2A6NJW9 211 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 SDHDO14521 159 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 PCDH17O14917 1159 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 ARHGEF15O94989 841 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 MAS1P04201 325 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 PABPC4LP0CB38 370 aaKnown RBP21.98■■□□□ 1.11
NPAS3-201ENST00000346562 CD8BP10966 210 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 MAGEA3P43357 314 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 ART1P52961 327 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 TMEM236Q5W0B7 351 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 CCDC106Q9BWC9 280 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 H2AFB2P0C5Z0 115 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 KDELR2P33947 212 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 ACVR1BP36896 505 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 USF2Q15853 346 aaPredicted RBP21.98■■□□□ 1.11
NPAS3-201ENST00000346562 OR4N5Q8IXE1 308 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 TMEM185BQ9H7F4 350 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 CDKN2DP55273 166 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 HMGN2P46Q86SG4 172 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 FMO6PO60774 539 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 FNTBP49356 437 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 TDGQ13569 410 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 RAB33AQ14088 237 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 COL28A1Q2UY09 1125 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 HAGHLQ6PII5 290 aaPredicted RBP21.98■■□□□ 1.11
NPAS3-201ENST00000346562 LHFPL3Q86UP9 236 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 POC1BQ8TC44 478 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 RRNAD1Q96FB5 475 aaKnown RBP21.98■■□□□ 1.11
NPAS3-201ENST00000346562 SLC41A3Q96GZ6 507 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 KLHL13Q9P2N7 655 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 UBQLN2Q9UHD9 624 aa21.98■■□□□ 1.11
NPAS3-201ENST00000346562 TMX2-CTNND1H3BSU7 103 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 ADH6P28332 368 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 SLC6A8P48029 635 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 PLEKHO2Q8TD55 490 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 TCEAL4Q96EI5 215 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 PHB2Q99623 299 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 NKX1-2Q9UD57 310 aaPredicted RBP21.97■■□□□ 1.11
NPAS3-201ENST00000346562 F5H0A9 414 aaPredicted RBP21.97■■□□□ 1.11
NPAS3-201ENST00000346562 POLR1CO15160 346 aaPredicted RBP21.97■■□□□ 1.11
NPAS3-201ENST00000346562 PROZP22891 400 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 VIPR2P41587 438 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 MAP2K4P45985 399 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 ZNF81P51508 661 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 RPS26P62854 115 aaKnown RBP21.97■■□□□ 1.11
NPAS3-201ENST00000346562 MZT1Q08AG7 82 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 RBM39Q14498 530 aaKnown RBP21.97■■□□□ 1.11
NPAS3-201ENST00000346562 GRIN2CQ14957 1233 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 ARL6IP1Q15041 203 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 ECHDC3Q96DC8 303 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 C10orf71Q711Q0 1435 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 EIF3FO00303 357 aaPredicted RBP21.97■■□□□ 1.11
NPAS3-201ENST00000346562 RFPL1O75677 317 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 CTSAP10619 480 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 PITPNBP48739 271 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 AKR1C2P52895 323 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 CLDN8P56748 225 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 APOFQ13790 326 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 SFT2D3Q587I9 215 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 MAMDC4Q6UXC1 1216 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 SLC16A9Q7RTY1 509 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 RHBDD1Q8TEB9 315 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 EIF5A2Q9GZV4 153 aaKnown RBP21.97■■□□□ 1.11
NPAS3-201ENST00000346562 NENFQ9UMX5 172 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 HSPB11Q9Y547 144 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 RFPL2O75678 378 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 EPHA4P54764 986 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 SIM1P81133 766 aaPredicted RBP21.97■■□□□ 1.11
NPAS3-201ENST00000346562 SCAPQ12770 1279 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 KCNAB2Q13303 367 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 RTP2Q5QGT7 225 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 AADACL4Q5VUY2 407 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 CCDC71LQ8N9Z2 235 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 SYT3Q9BQG1 590 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 HSD3B7Q9H2F3 369 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 CWH43Q9H720 699 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 ENTPD2Q9Y5L3 495 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 TRAPPC13A5PLN9 417 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 CD63P08962 238 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 BPIP17213 487 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 SOX4Q06945 474 aaPredicted RBP21.97■■□□□ 1.11
NPAS3-201ENST00000346562 LANCL3Q6ZV70 420 aa21.97■■□□□ 1.11
NPAS3-201ENST00000346562 SYNPOQ8N3V7 929 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms