RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 RCBTB1Q8NDN9 531 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 GEMIN6Q8WXD5 167 aaKnown RBP12.69□□□□□ -0.38
CDC42-202ENST00000344548 TANKQ92844 425 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 MOAP1Q96BY2 351 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 CTHRC1Q96CG8 243 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 AASSQ9UDR5 926 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 SEC14L3Q9UDX4 400 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 MKLN1Q9UL63 735 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 C19orf53Q9UNZ5 99 aaPredicted RBP12.69□□□□□ -0.38
CDC42-202ENST00000344548 GPR55Q9Y2T6 319 aaPredicted RBP12.69□□□□□ -0.38
CDC42-202ENST00000344548 SPACA6W5XKT8 324 aa12.69□□□□□ -0.38
CDC42-202ENST00000344548 ASCC3Q8N3C0 2202 aaKnown RBP12.69□□□□□ -0.38
CDC42-202ENST00000344548 MN1Q10571 1320 aaPredicted RBP12.68□□□□□ -0.38
CDC42-202ENST00000344548 CLDN24A6NM45 220 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 OR2B3O76000 313 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 CBX7O95931 251 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 S1PR1P21453 382 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 ELK4P28324 431 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 CRISP3P54108 245 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 FOXL2P58012 376 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 LSM11P83369 360 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDC42-202ENST00000344548 IL1RL1Q01638 556 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 SPIBQ01892 262 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 SLC13A2Q13183 592 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 EXOC3L2Q2M3D2 409 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 MLIPQ5VWP3 458 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 KRT80Q6KB66 452 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 VRK2Q86Y07 508 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 PLXDC1Q8IUK5 500 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 SLC30A8Q8IWU4 369 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 EID2Q8N6I1 236 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 DTWD2Q8NBA8 298 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 OR51Q1Q8NH59 317 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 OR4C6Q8NH72 309 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 PIK3R3Q92569 461 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 ZC3H10Q96K80 434 aaKnown RBP12.68□□□□□ -0.38
CDC42-202ENST00000344548 MS4A4EQ96PG1 132 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 CD180Q99467 661 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 GABARAPL1Q9H0R8 117 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 CAPN10Q9HC96 672 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 BCL2L10Q9HD36 194 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 PRDM9Q9NQV7 894 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 ENPP4Q9Y6X5 453 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 TNFRSF11BO00300 401 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 FRS3O43559 492 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 IFNA14P01570 189 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 ATP6V1B1P15313 513 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 HOXB6P17509 224 aaKnown RBP12.68□□□□□ -0.38
CDC42-202ENST00000344548 ALAS2P22557 587 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 RNF144AP50876 292 aaPredicted RBP12.68□□□□□ -0.38
CDC42-202ENST00000344548 EXOSC6Q5RKV6 272 aaKnown RBP12.68□□□□□ -0.38
CDC42-202ENST00000344548 PEAR1Q5VY43 1037 aaPredicted RBP12.68□□□□□ -0.38
CDC42-202ENST00000344548 HEPHL1Q6MZM0 1159 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 CDC73Q6P1J9 531 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 ZC3H14Q6PJT7 736 aaKnown RBP12.68□□□□□ -0.38
CDC42-202ENST00000344548 D2HGDHQ8N465 521 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 OR9Q2Q8NGE9 314 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 ADAMTS15Q8TE58 950 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 SLC41A2Q96JW4 573 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 CHRNA10Q9GZZ6 450 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 ZNF696Q9H7X3 374 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 BATF3Q9NR55 127 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 GIN1Q9NXP7 522 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 SEMA5BQ9P283 1151 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 IFT80Q9P2H3 777 aaPredicted RBP12.68□□□□□ -0.38
CDC42-202ENST00000344548 PCDHGB3Q9Y5G1 929 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 PCDHGA8Q9Y5G5 932 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 ADAMTS20P59510 1910 aa12.68□□□□□ -0.38
CDC42-202ENST00000344548 DSPPQ9NZW4 1301 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 A8MVJ9 347 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 H3BNH8 94 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 ZNF749O43361 778 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 PLOD3O60568 738 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 DPM1O60762 260 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 DNAJB5O75953 348 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 TFAP2AP05549 437 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 RNH1P13489 461 aaKnown RBP12.67□□□□□ -0.38
CDC42-202ENST00000344548 IGFBP5P24593 272 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 LIMS1P48059 325 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 GPLD1P80108 840 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 NDUFA9Q16795 377 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 INAVAQ3KP66 663 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 LAIR2Q6ISS4 152 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 FAHD1Q6P587 224 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 Q6ZPB1 254 aaPredicted RBP12.67□□□□□ -0.38
CDC42-202ENST00000344548 SAMD14Q8IZD0 417 aaPredicted RBP12.67□□□□□ -0.38
CDC42-202ENST00000344548 ZNF786Q8N393 782 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 SLC5A8Q8N695 610 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 OR6T1Q8NGN1 323 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 ZNF354BQ96LW1 612 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 FEVQ99581 238 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 EPYCQ99645 322 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 NECTIN3Q9NQS3 549 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 CTPS2Q9NRF8 586 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 PNPLA3Q9NST1 481 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 CUTCQ9NTM9 273 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 PTGFRNQ9P2B2 879 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 SUSD2Q9UGT4 822 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 DTX4Q9Y2E6 619 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 TRBV4-1A0A0J9YWV2 114 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms