RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 PODNL1Q6PEZ8 512 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 KIAA1324Q6UXG2 1013 aaKnown RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 DEF8Q6ZN54 512 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 ZER1Q7Z7L7 766 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 ASPGQ86U10 573 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 HORMAD2Q8N7B1 307 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 MORN4Q8NDC4 146 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 DBF4BQ8NFT6 615 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 OR52N1Q8NH53 320 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 ADAMTS19Q8TE59 1207 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 SMG7Q92540 1137 aaKnown RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 KLHL15Q96M94 604 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 THAP7Q9BT49 309 aaPredicted RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 DPCDQ9BVM2 203 aaPredicted RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 CLEC4MQ9H2X3 399 aaPredicted RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 DPAGT1Q9H3H5 408 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 OSGEPL1Q9H4B0 414 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 CXorf36Q9H7Y0 433 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 DMRT3Q9NQL9 472 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 MAN2C1Q9NTJ4 1040 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF224Q9NZL3 707 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 KIF25Q9UIL4 384 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF222Q9UK12 451 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 NINQ8N4C6 2090 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 G3V3Q6 166 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 CHST10O43529 356 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 NDUFA2O43678 99 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 LZTS3O60299 673 aaPredicted RBP9.12□□□□□ -0.95
HOXA1-201ENST00000343060 EFCAB14O75071 495 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 PPM1BO75688 479 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 EOMESO95936 686 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 IGHA1P01876 353 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 EPHX1P07099 455 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 CXCL3P19876 107 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 IMPA1P29218 277 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 GKP32189 559 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 EPHA5P54756 1037 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 PTSQ03393 145 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 C2orf80Q0P641 193 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 FOXD4Q12950 439 aaPredicted RBP9.12□□□□□ -0.95
HOXA1-201ENST00000343060 DUSP4Q13115 394 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 FGFBP1Q14512 234 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 NTRK2Q16620 822 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 CCL14Q16627 93 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 SEZ6L2Q6UXD5 910 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 FGD2Q7Z6J4 655 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 OAFQ86UD1 273 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 NR2C2APQ86WQ0 139 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 RBM45Q8IUH3 476 aaKnown RBP9.12□□□□□ -0.95
HOXA1-201ENST00000343060 ZFP41Q8N8Y5 198 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 WFDC5Q8TCV5 224 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 ECHDC3Q96DC8 303 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 NXPE2Q96DL1 559 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 SCRN2Q96FV2 425 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 PARK7Q99497 189 aaKnown RBP9.12□□□□□ -0.95
HOXA1-201ENST00000343060 GPA33Q99795 319 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 NLNQ9BYT8 704 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 DLL4Q9NR61 685 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 ENAMQ9NRM1 1142 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 GKN1Q9NS71 199 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF275Q9NSD4 429 aaPredicted RBP9.12□□□□□ -0.95
HOXA1-201ENST00000343060 IMP3Q9NV31 184 aaKnown RBP9.12□□□□□ -0.95
HOXA1-201ENST00000343060 NUDT15Q9NV35 164 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 MED9Q9NWA0 146 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 TMEM161AQ9NX61 479 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 COQ3Q9NZJ6 369 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 CLCA2Q9UQC9 943 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 CARNS1A5YM72 827 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 C5orf58C9J3I9 102 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 NPC1O15118 1278 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF821O75541 412 aaPredicted RBP9.12□□□□□ -0.95
HOXA1-201ENST00000343060 UBXN7O94888 489 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 APOL3O95236 402 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 GSTM3P21266 225 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 SERPINA4P29622 427 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 THBS2P35442 1172 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 SLC6A11P48066 632 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 BDH1Q02338 343 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 FAM26DQ5JW98 314 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 GARNL3Q5VVW2 1013 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 RETSATQ6NUM9 610 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 TMEM81Q6P7N7 255 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 RFLNAQ6ZTI6 216 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 OR4K5Q8NGD3 323 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 WDR48Q8TAF3 677 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 OTUB1Q96FW1 271 aaPredicted RBP9.12□□□□□ -0.95
HOXA1-201ENST00000343060 WFDC6Q9BQY6 131 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 REG4Q9BYZ8 158 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 GSX2Q9BZM3 304 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 EMC3Q9P0I2 261 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 TAAR2Q9P1P5 351 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 COPZ2Q9P299 210 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 PCDH10Q9P2E7 1040 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 SCP2D1Q9UJQ7 156 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 LIPT1Q9Y234 373 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 EXOGQ9Y2C4 368 aaKnown RBP9.12□□□□□ -0.95
HOXA1-201ENST00000343060 RWDD3Q9Y3V2 267 aa9.12□□□□□ -0.95
HOXA1-201ENST00000343060 TEX13CA0A0J9YWL9 993 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 ATP6V1G2-DDX39BF2Z307 99 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms