RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 KLK8O60259 260 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 HIST1H2ABP04908 130 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 DUX4L2P0CJ85 424 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 DUX4L3P0CJ86 424 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 DUX4L4P0CJ87 422 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 DUX4L5P0CJ88 424 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 DUX4L6P0CJ89 424 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 DUX4L7P0CJ90 424 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 STOMP27105 288 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 NTRK2Q16620 822 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 HIST3H2AQ7L7L0 130 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 PTOV1Q86YD1 416 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 LILRB4Q8NHJ6 448 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 HIST1H2ACQ93077 130 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 SAMD8Q96LT4 415 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 TREX2Q9BQ50 279 aaPredicted RBP11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 CDADC1Q9BWV3 514 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 DPAGT1Q9H3H5 408 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 NLGN3Q9NZ94 848 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 DUX4Q9UBX2 424 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 GNG8Q9UK08 70 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 PCDHGA2Q9Y5H1 932 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 NPIPA5A0A0B4J1W7 369 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 IGLON5A6NGN9 336 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 NPIPA7E9PJI5 369 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 GPX5O75715 221 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 RHOP08100 348 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 NPIPA8P0DM63 369 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 EDNRAP25101 427 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 OR12D2P58182 307 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 RHAGQ02094 409 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 HSF2Q03933 536 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF385BQ569K4 471 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 LRIF1Q5T3J3 769 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 KHDRBS2Q5VWX1 349 aaKnown RBP11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 MEDAGQ5VYS4 303 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 ALG1LQ6GMV1 187 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 HMGB4Q8WW32 186 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 C1QTNF3Q9BXJ4 246 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 SLIRPQ9GZT3 109 aaKnown RBP11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 SPAG17Q6Q759 2223 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 TAF1LQ8IZX4 1826 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 TMEM189-UBE2V1I3L0A0 370 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 HMGA1P17096 107 aaKnown RBP11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 DDX6P26196 483 aaKnown RBP eCLIP11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 ACADLP28330 430 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 SSTR2P30874 369 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 MNDAP41218 407 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 STARP49675 285 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 MAZP56270 477 aaKnown RBP11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 PPP3R1P63098 170 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 IFITM3Q01628 133 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 ZC3H14Q6PJT7 736 aaKnown RBP11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 RBM18Q96H35 190 aaKnown RBP11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 TTLL2Q9BWV7 592 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 CACNG6Q9BXT2 260 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 SAP130Q9H0E3 1048 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 FZD3Q9NPG1 666 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 SOHLH2Q9NX45 425 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF69Q9UC07 566 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 POLR1DQ9Y2S0 133 aa11.77□□□□□ -0.52
SNRNP48-201ENST00000342415 FXYD6-FXYD2A0A087WZ82 144 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 GRXCR1A8MXD5 290 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 CD3GP09693 182 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 AHCYP23526 432 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 RPS25P62851 125 aaKnown RBP11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 KCNJ10P78508 379 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 ZNF750Q32MQ0 723 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 LRIT3Q3SXY7 679 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 MSANTD1Q6ZTZ1 278 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 GAREM2Q75VX8 874 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 CCDC28AQ8IWP9 274 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 L3MBTL4Q8NA19 623 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 NLGN4YQ8NFZ3 816 aaPredicted RBP11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 PJA1Q8NG27 643 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 ZNF563Q8TA94 476 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 AKAP1Q92667 903 aaKnown RBP eCLIP11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 FXYD6Q9H0Q3 95 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 C11orf54Q9H0W9 315 aaPredicted RBP11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 ABCG4Q9H172 646 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 DPEP2Q9H4A9 486 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 CALML5Q9NZT1 146 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 NEU3Q9UQ49 428 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 FKBP7Q9Y680 259 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 PCM1Q15154 2024 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 DOCK3Q8IZD9 2030 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 FAM171A2A8MVW0 826 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 KMOO15229 486 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 ZNF24P17028 368 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 HK1P19367 917 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 SDHBP21912 280 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 ACVR2AP27037 513 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 PSMD4P55036 377 aaKnown RBP11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 STXBP1P61764 594 aaKnown RBP11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 MGAT3Q09327 533 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 PIP5KL1Q5T9C9 394 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 IRAK1BP1Q5VVH5 260 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 ANKRD54Q6NXT1 300 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 ENPP7Q6UWV6 458 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 LIPIQ6XZB0 460 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms