RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 ZNF300Q96RE9 604 aaPredicted RBP16.1■□□□□ 0.17
ATAD3A-201ENST00000339113 TREX2Q9BQ50 279 aaPredicted RBP16.1■□□□□ 0.17
ATAD3A-201ENST00000339113 CCDC3Q9BQI4 270 aa16.1■□□□□ 0.17
ATAD3A-201ENST00000339113 C3orf18Q9UK00 162 aa16.1■□□□□ 0.17
ATAD3A-201ENST00000339113 SNX5Q9Y5X3 404 aa16.1■□□□□ 0.17
ATAD3A-201ENST00000339113 MUC3AQ02505 3323 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 SGK494L7N484 410 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 SLC22A1O15245 554 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 BCAT2O15382 392 aaPredicted RBP16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 SLC16A6O15403 523 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 GALR3O60755 368 aaPredicted RBP16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 GABARAPO95166 117 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 IFNA14P01570 189 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 SOX18P35713 384 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 TMED10P49755 219 aaKnown RBP16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 CD47Q08722 323 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 C6orf132Q5T0Z8 1188 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 KDM4DQ6B0I6 523 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 OGFOD3Q6PK18 319 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 WDR53Q7Z5U6 358 aaPredicted RBP16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 HMGN2P46Q86SG4 172 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 MCATQ8IVS2 390 aaKnown RBP16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 ARHGEF39Q8N4T4 335 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 NUP43Q8NFH3 380 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 OR4K14Q8NGD5 310 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 SFXN5Q8TD22 340 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 NODALQ96S42 347 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 WFDC6Q9BQY6 131 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 EQTNQ9NQ60 294 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 NECTIN3Q9NQS3 549 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 DAPK2Q9UIK4 370 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 LYVE1Q9Y5Y7 322 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 CEP192Q8TEP8 1941 aa16.09■□□□□ 0.17
ATAD3A-201ENST00000339113 HTR3EA5X5Y0 456 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 EMC8O43402 210 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 DPM1O60762 260 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 LDB3O75112 727 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 CNOT3O75175 753 aaKnown RBP16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 PIAS2O75928 621 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 MED26O95402 600 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 FHP07954 510 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 ACVR2AP27037 513 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 RXRGP48443 463 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 ARHGDIAP52565 204 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 GFERP55789 205 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 MEP1AQ16819 746 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 CTU2Q2VPK5 515 aaKnown RBP16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 RFX4Q33E94 735 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 MANEAQ5SRI9 462 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 NKAIN2Q5VXU1 208 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 LAIR2Q6ISS4 152 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 ZNF655Q8N720 491 aaPredicted RBP16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 OR7G2Q8NG99 324 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 OR52J3Q8NH60 311 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 APOBEC4Q8WW27 367 aaKnown RBP16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 SGCDQ92629 289 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 DUSP15Q9H1R2 295 aaPredicted RBP16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 FBXO8Q9NRD0 319 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 FAM32AQ9Y421 112 aaKnown RBP16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 ZNF451Q9Y4E5 1061 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 PCDHGB3Q9Y5G1 929 aa16.08■□□□□ 0.17
ATAD3A-201ENST00000339113 CACNA1IQ9P0X4 2223 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 LOC100130705A0A1B0GUX0 176 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 A0A1B0GVT2 93 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 CYR61O00622 381 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 NR2F1P10589 423 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 ZNF10P21506 573 aaPredicted RBP16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 IGFBP5P24593 272 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 GP2P55259 537 aaKnown RBP16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 TPD52P55327 224 aaPredicted RBP16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 IL1RL1Q01638 556 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 LRRC25Q8N386 305 aaPredicted RBP16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 DNAJC22Q8N4W6 341 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 GEMIN6Q8WXD5 167 aaKnown RBP16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 GIMAP5Q96F15 307 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 COL21A1Q96P44 957 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 EPYCQ99645 322 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 UCK1Q9HA47 277 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 LYRM4Q9HD34 91 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 THSD1Q9NS62 852 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 P2RX2Q9UBL9 471 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 SPEGQ15772 3267 aa16.08■□□□□ 0.16
ATAD3A-201ENST00000339113 LILRA5A6NI73 299 aa16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 ZNF99A8MXY4 864 aaPredicted RBP16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 SLC1A7O00341 560 aa16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 CHRM4P08173 479 aa16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 TLX1P31314 330 aaPredicted RBP16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 AFF3P51826 1226 aaKnown RBP16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 SHC2P98077 582 aa16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 ZNF691Q5VV52 312 aa16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 FAM111BQ6SJ93 734 aa16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 ZBTB46Q86UZ6 589 aa16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 COMTD1Q86VU5 262 aa16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 CA13Q8N1Q1 262 aa16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 OR56A1Q8NGH5 318 aa16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 OR9A4Q8NGU2 314 aa16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 MS4A12Q9NXJ0 267 aa16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 SCN2AQ99250 2005 aa16.07■□□□□ 0.16
ATAD3A-201ENST00000339113 TNFRSF11BO00300 401 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms