RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 TNFRSF1BP20333 461 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 EPHA8P29322 1005 aaPredicted RBP15.22■□□□□ 0.03
HPS1-202ENST00000338546 PPM1FP49593 454 aaPredicted RBP15.22■□□□□ 0.03
HPS1-202ENST00000338546 CDH12P55289 794 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 OR1D5P58170 312 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 MAP4K2Q12851 820 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 PRICKLE4Q2TBC4 344 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 ARHGAP11BQ3KRB8 267 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 PEAR1Q5VY43 1037 aaPredicted RBP15.22■□□□□ 0.03
HPS1-202ENST00000338546 AP1ARQ63HQ0 302 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 C16orf62Q7Z3J2 963 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 OR4N5Q8IXE1 308 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 OFCC1Q8IZS5 231 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 CDRT4Q8N9R6 151 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 TMEM52Q8NDY8 209 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 OR10G2Q8NGC3 310 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 FBLIM1Q8WUP2 373 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 SLC35A4Q96G79 324 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 YIPF4Q9BSR8 244 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 GABARAPL3Q9BY60 117 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 SOX17Q9H6I2 414 aaPredicted RBP15.22■□□□□ 0.03
HPS1-202ENST00000338546 DUSP22Q9NRW4 184 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 SATB2Q9UPW6 733 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 HCN4Q9Y3Q4 1203 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 CCDC88CQ9P219 2028 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 TNRC6BQ9UPQ9 1833 aaKnown RBP15.21■□□□□ 0.03
HPS1-202ENST00000338546 A0A0A6YYC8 382 aaPredicted RBP15.21■□□□□ 0.03
HPS1-202ENST00000338546 A0A1B0GTQ1 180 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 I3L1I5 382 aaPredicted RBP15.21■□□□□ 0.03
HPS1-202ENST00000338546 BCKDKO14874 412 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 LDB3O75112 727 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 COQ9O75208 318 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 OXSR1O95747 527 aaPredicted RBP15.21■□□□□ 0.03
HPS1-202ENST00000338546 GUSBP08236 651 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 LINGO3P0C6S8 592 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 NT5EP21589 574 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 PRKAR1BP31321 381 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 GALNSP34059 522 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 PIGAP37287 484 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 TPD52P55327 224 aaPredicted RBP15.21■□□□□ 0.03
HPS1-202ENST00000338546 HPCAP84074 193 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 MGAT2Q10469 447 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 PLK5Q496M5 336 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 YOD1Q5VVQ6 348 aaPredicted RBP15.21■□□□□ 0.03
HPS1-202ENST00000338546 TCTN3Q6NUS6 607 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 DHRS4L2Q6PKH6 230 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 FAM111BQ6SJ93 734 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 KANSL1Q7Z3B3 1105 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 RABEPKQ7Z6M1 372 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 D2HGDHQ8N465 521 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 LINC00471Q8N535 108 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 CHDHQ8NE62 594 aaPredicted RBP15.21■□□□□ 0.03
HPS1-202ENST00000338546 PHF10Q8WUB8 498 aaKnown RBP15.21■□□□□ 0.03
HPS1-202ENST00000338546 HOXB13Q92826 284 aaPredicted RBP15.21■□□□□ 0.03
HPS1-202ENST00000338546 ZC3H10Q96K80 434 aaKnown RBP15.21■□□□□ 0.03
HPS1-202ENST00000338546 ZNF578Q96N58 590 aaPredicted RBP15.21■□□□□ 0.03
HPS1-202ENST00000338546 APOL4Q9BPW4 351 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 SLC38A1Q9H2H9 487 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 MTHFD2LQ9H903 347 aaPredicted RBP15.21■□□□□ 0.03
HPS1-202ENST00000338546 MAT2BQ9NZL9 334 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 POFUT2Q9Y2G5 429 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 IFT52Q9Y366 437 aa15.21■□□□□ 0.03
HPS1-202ENST00000338546 FAM227AF5H4B4 570 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 B4GAT1O43505 415 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 CCNB2O95067 398 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 ALPPP05187 535 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 CTSBP07858 339 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 ALOX5P09917 674 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 PTGER1P34995 402 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 SOX18P35713 384 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 ARL4DP49703 201 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 HLCSP50747 726 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 HSD17B7P56937 341 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 ISL1P61371 349 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 EXOC3L2Q2M3D2 409 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 NKAIN2Q5VXU1 208 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 ANKRD34AQ69YU3 496 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 TSPYL5Q86VY4 417 aaPredicted RBP15.2■□□□□ 0.02
HPS1-202ENST00000338546 C1orf210Q8IVY1 113 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 SLC41A2Q96JW4 573 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 PITX2Q99697 317 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 PELOQ9BRX2 385 aaKnown RBP15.2■□□□□ 0.02
HPS1-202ENST00000338546 ZNF556Q9HAH1 456 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 CACYBPQ9HB71 228 aaKnown RBP15.2■□□□□ 0.02
HPS1-202ENST00000338546 EQTNQ9NQ60 294 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 POLE3Q9NRF9 147 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 PAPOLBQ9NRJ5 636 aaKnown RBP15.2■□□□□ 0.02
HPS1-202ENST00000338546 BLOC1S6Q9UL45 172 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 NDRG4Q9ULP0 352 aaKnown RBP15.2■□□□□ 0.02
HPS1-202ENST00000338546 TMCC3Q9ULS5 477 aa15.2■□□□□ 0.02
HPS1-202ENST00000338546 TTC36A6NLP5 189 aa15.19■□□□□ 0.02
HPS1-202ENST00000338546 ZNF749O43361 778 aa15.19■□□□□ 0.02
HPS1-202ENST00000338546 MITFO75030 526 aaPredicted RBP15.19■□□□□ 0.02
HPS1-202ENST00000338546 SEC24DO94855 1032 aaPredicted RBP15.19■□□□□ 0.02
HPS1-202ENST00000338546 PDGFBP01127 241 aaPredicted RBP15.19■□□□□ 0.02
HPS1-202ENST00000338546 CD1CP29017 333 aa15.19■□□□□ 0.02
HPS1-202ENST00000338546 CNR2P34972 360 aa15.19■□□□□ 0.02
HPS1-202ENST00000338546 MAP3K8P41279 467 aa15.19■□□□□ 0.02
HPS1-202ENST00000338546 CXCR4P61073 352 aa15.19■□□□□ 0.02
HPS1-202ENST00000338546 NPRL3Q12980 569 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms