RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 PAPD5Q8NDF8 572 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 OR52R1Q8NGF1 315 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SLC47A1Q96FL8 570 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SLC35A4Q96G79 324 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PYURFQ96I23 114 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PELOQ9BRX2 385 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CNPPD1Q9BV87 410 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TGIF2Q9GZN2 237 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 VN1R1Q9GZP7 353 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 C6orf203Q9P0P8 240 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ZNF639Q9UID6 485 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 RIMS3Q9UJD0 308 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 RPS6KA6Q9UK32 745 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 IGLV3-12A0A075B6K2 115 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 A8MUA0 341 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TMX2-CTNND1H3BSU7 103 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 M0QX08 132 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ASNA1O43681 348 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ONECUT2O95948 504 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 RECKO95980 971 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 RAP2AP10114 183 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ACP2P11117 423 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SSTR4P31391 388 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ETV5P41161 510 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CLCN2P51788 898 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 MAPK10P53779 464 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TXNL4AP83876 142 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FUT5Q11128 374 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 DUSP8Q13202 625 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 NSDHLQ15738 373 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CYBRD1Q53TN4 286 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 RAB11FIP2Q7L804 512 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 OLIG3Q7RTU3 272 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SLCO6A1Q86UG4 719 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TMEM151BQ8IW70 566 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TPD52L3Q96J77 140 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CHID1Q9BWS9 393 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 AKIRIN1Q9H9L7 192 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 IFT80Q9P2H3 777 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ERVK-19Q9WJR5 959 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 MUC6Q6W4X9 2439 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PMS2P1A4D2B8 440 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 DUXAA6NLW8 204 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 C17orf105B2RV13 164 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PGM3O95394 542 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 GALNSP34059 522 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 GPAT3Q53EU6 434 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CRB2Q5IJ48 1285 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 MLIPQ5VWP3 458 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 LPCAT4Q643R3 524 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HMBOX1Q6NT76 420 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 OVCH1Q7RTY7 1134 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ERMP1Q7Z2K6 904 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 VTCN1Q7Z7D3 282 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 AMIGO2Q86SJ2 522 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 GLRX5Q86SX6 157 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TMEM102Q8N9M5 508 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CDS1Q92903 461 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TAMM41Q96BW9 452 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ULBP3Q9BZM4 244 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SEMA6AQ9H2E6 1030 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SOX17Q9H6I2 414 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ADPRHL2Q9NX46 363 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 B3GALT1Q9Y5Z6 326 aa13.75□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TCRBV16S1A1N1A0A5B0 115 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SUV39H1O43463 412 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 COQ9O75208 318 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 AGXTP21549 392 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TRIP10Q15642 601 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 DUSP5Q16690 384 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 DCAF12Q5T6F0 453 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ATAD3BQ5T9A4 648 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HES3Q5TGS1 186 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FAAH2Q6GMR7 532 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PATL1Q86TB9 770 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 METTL25Q8N6Q8 603 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CDRT4Q8N9R6 151 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PLPP5Q8NEB5 264 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PTPMT1Q8WUK0 201 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 POP5Q969H6 163 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 LIN37Q96GY3 246 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HSH2DQ96JZ2 352 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TREX2Q9BQ50 279 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 RUBCNLQ9H714 662 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 C14orf105Q9NVL8 296 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PISDQ9UG56 409 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FAM149AA5PLN7 773 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TMEM229AB2RXF0 380 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 KLK3P07288 261 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HEXBP07686 556 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CHRM4P08173 479 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ALOX5P09917 674 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FASP25445 335 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 GCKP35557 465 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 EMDP50402 254 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CRISP3P54108 245 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SELENOWP63302 87 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FUT7Q11130 342 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ZNF155Q12901 538 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 GNA13Q14344 377 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms