RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CMKLR1Q99788 373 aa13.08□□□□□ -0.32
RTN4-202ENST00000337526 POTEKPQ9BYX7 375 aa13.08□□□□□ -0.32
RTN4-202ENST00000337526 ARHGAP39Q9C0H5 1083 aa13.08□□□□□ -0.32
RTN4-202ENST00000337526 MTG2Q9H4K7 406 aa13.08□□□□□ -0.32
RTN4-202ENST00000337526 SACM1LQ9NTJ5 587 aa13.08□□□□□ -0.32
RTN4-202ENST00000337526 OR6C74A6NCV1 312 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 UPK1BO75841 260 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 GGT2P36268 569 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 GPR143P51810 404 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 WNT4P56705 351 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 CXCR4P61073 352 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 COL9A2Q14055 689 aaPredicted RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 FAM76BQ5HYJ3 339 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 RPS26P11Q5JNZ5 115 aaPredicted RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 SYNPOQ8N3V7 929 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 CCDC54Q8NEL0 328 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 PXYLP1Q8TE99 480 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 KLHDC7BQ96G42 594 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 ZNF717Q9BY31 904 aaPredicted RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 IRS2Q9Y4H2 1338 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 RP1L1Q8IWN7 2480 aaPredicted RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 HMGB3O15347 200 aaKnown RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 RP2O75695 350 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 C21orf33P30042 268 aaPredicted RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 PUS10Q3MIT2 529 aaKnown RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 GPR149Q86SP6 731 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 ELMOD2Q8IZ81 293 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 TMEM156Q8N614 296 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 COQ8AQ8NI60 647 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 NEIL2Q969S2 332 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 SGTBQ96EQ0 304 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 ZBED3Q96IU2 234 aaPredicted RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 RGS9O75916 674 aaPredicted RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 SCGB1D2O95969 90 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 TMPRSS9Q7Z410 1059 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 METTL27Q8N6F8 245 aaPredicted RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 CIDECQ96AQ7 238 aaPredicted RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 MTHFD2LQ9H903 347 aaPredicted RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 IL21RQ9HBE5 538 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 UBQLN2Q9UHD9 624 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 SERTAD3Q9UJW9 196 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 RNASET2O00584 256 aaKnown RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 ACTA2P62736 377 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 ACTG2P63267 376 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 POU4F2Q12837 409 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 GXYLT1Q4G148 440 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 ARHGAP11AQ6P4F7 1023 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 B3GNT7Q8NFL0 401 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 LMX1AQ8TE12 382 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 ZNF700Q9H0M5 742 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 GPN2Q9H9Y4 310 aaPredicted RBP13.07□□□□□ -0.32
RTN4-202ENST00000337526 C5P01031 1676 aa13.07□□□□□ -0.32
RTN4-202ENST00000337526 GABRR3A8MPY1 467 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 M0R129 80 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 NARSO43776 548 aaKnown RBP13.06□□□□□ -0.32
RTN4-202ENST00000337526 AK1P00568 194 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 ADORA3P0DMS8 318 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 RAB3BP20337 219 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 CCR7P32248 378 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 ADRA1AP35348 466 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 CBFBQ13951 182 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 OR52E2Q8NGJ4 325 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 HYLS1Q96M11 299 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 GAS2L1Q99501 681 aaPredicted RBP13.06□□□□□ -0.32
RTN4-202ENST00000337526 ARL6Q9H0F7 186 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 METTL7AQ9H8H3 244 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 MGAT4CQ9UBM8 478 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 MAFFQ9ULX9 164 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 CAPNS1P04632 268 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 CDKN2CP42773 168 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 SUOXP51687 545 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 RPS15AP62244 130 aaKnown RBP13.06□□□□□ -0.32
RTN4-202ENST00000337526 DESI1Q6ICB0 168 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 DGLUCYQ7Z3D6 616 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 WDR20Q8TBZ3 569 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 CHFRQ96EP1 664 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 DNAJA3Q96EY1 480 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 NAA50Q9GZZ1 169 aaKnown RBP13.06□□□□□ -0.32
RTN4-202ENST00000337526 SLC2A4RGQ9NR83 387 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 MYH4Q9Y623 1939 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 TIAM2Q8IVF5 1701 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 ANTXRLA6NF34 631 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 C12orf71A8MTZ7 269 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 TGM5O43548 720 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 VNN2O95498 520 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 ALPLP05186 524 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 ATXN1LP0C7T5 689 aaKnown RBP13.06□□□□□ -0.32
RTN4-202ENST00000337526 RNH1P13489 461 aaKnown RBP13.06□□□□□ -0.32
RTN4-202ENST00000337526 FRMPD2BQ6IN97 320 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 LRFN4Q6PJG9 635 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 CPOQ8IVL8 374 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 RASGEF1AQ8N9B8 481 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 TMEM102Q8N9M5 508 aaPredicted RBP13.06□□□□□ -0.32
RTN4-202ENST00000337526 OR4K13Q8NH42 304 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 RAD9AQ99638 391 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 DPCDQ9BVM2 203 aaPredicted RBP13.06□□□□□ -0.32
RTN4-202ENST00000337526 ATG5Q9H1Y0 275 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 ABCD2Q9UBJ2 740 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 OR1A2Q9Y585 309 aa13.06□□□□□ -0.32
RTN4-202ENST00000337526 ALS2Q96Q42 1657 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms