RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 EXOC3L2Q2M3D2 409 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 AMZ2Q86W34 360 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 DNAJC22Q8N4W6 341 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 ANKRD53Q8N9V6 530 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.13□□□□□ -0.311e-8■□□□□ 10.2
SF1-202ENST00000334944 TAAR2Q9P1P5 351 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 NFKBIL1Q9UBC1 381 aaPredicted RBP13.13□□□□□ -0.31
SF1-202ENST00000334944 HCN2Q9UL51 889 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 PLEKHM1Q9Y4G2 1056 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 EDDM13A0A1B0GTR0 161 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 CARNS1A5YM72 827 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 RNASET2O00584 256 aaKnown RBP13.13□□□□□ -0.31
SF1-202ENST00000334944 PCDH17O14917 1159 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 LRRTM2O43300 516 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 TBX6O95947 436 aaPredicted RBP13.13□□□□□ -0.31
SF1-202ENST00000334944 ALPPP05187 535 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 CLCNKAP51800 687 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 CAV3P56539 151 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 B2MP61769 119 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 SELENOWP63302 87 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 VEZF1Q14119 521 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 GCNT6Q5T4J0 391 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 SHEQ5VZ18 495 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 TANGO2Q6ICL3 276 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 ANKRD54Q6NXT1 300 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 TTLQ8NG68 377 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 HERVK_113Q902F9 699 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 TMEM203Q969S6 136 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 EXOSC8Q96B26 276 aaKnown RBP13.13□□□□□ -0.31
SF1-202ENST00000334944 MTERF3Q96E29 417 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 OR52A5Q9H2C5 316 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 CXorf36Q9H7Y0 433 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 DIABLOQ9NR28 239 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 ING3Q9NXR8 418 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 ZNF282Q9UDV7 671 aaPredicted RBP13.13□□□□□ -0.31
SF1-202ENST00000334944 ATPIF1Q9UII2 106 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 HEATR5BQ9P2D3 2071 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 PLPP1O14494 284 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 MID1O15344 667 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 NME6O75414 186 aaPredicted RBP13.12□□□□□ -0.31
SF1-202ENST00000334944 HNRNPA1P09651 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
SF1-202ENST00000334944 ACP5P13686 325 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 HOXB3P14651 431 aaPredicted RBP13.12□□□□□ -0.31
SF1-202ENST00000334944 APEX1P27695 318 aaKnown RBP13.12□□□□□ -0.31
SF1-202ENST00000334944 PCGF2P35227 344 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 CDK6Q00534 326 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 BNC1Q01954 994 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 PPIGQ13427 754 aaKnown RBP eCLIP13.12□□□□□ -0.315e-11■□□□□ 9.8
SF1-202ENST00000334944 SSX1Q16384 188 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 AANATQ16613 207 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 SLC35F1Q5T1Q4 408 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 C10orf62Q5T681 223 aaPredicted RBP13.12□□□□□ -0.31
SF1-202ENST00000334944 PRSS42Q7Z5A4 293 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 ADGRF3Q8IZF5 1079 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 C9orf62Q8N4C0 152 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 OR2L2Q8NH16 312 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 DCLRE1CQ96SD1 692 aaKnown RBP13.12□□□□□ -0.31
SF1-202ENST00000334944 FAM83CQ9BQN1 747 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 SLC6A17Q9H1V8 727 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 ANKDD1BA6NHY2 528 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 CLCA1A8K7I4 914 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 CD72P21854 359 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 POU1F1P28069 291 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 TEKQ02763 1124 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 RGS1Q08116 209 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 FAM71E1Q6IPT2 247 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 LAS2Q8IYD9 372 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 C7orf61Q8IZ16 206 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 OR10G2Q8NGC3 310 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 FCGR1BQ92637 280 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 MYDGFQ969H8 173 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 ASB16Q96NS5 453 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 LIN7BQ9HAP6 207 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 SLC35C2Q9NQQ7 365 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 KCNK6Q9Y257 313 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 TRAPPC4Q9Y296 219 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 SLC27A6Q9Y2P4 619 aa13.12□□□□□ -0.31
SF1-202ENST00000334944 MRPS7Q9Y2R9 242 aaKnown RBP13.12□□□□□ -0.31
SF1-202ENST00000334944 SEC13P55735 322 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 PER3P56645 1201 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 WSCD2Q2TBF2 565 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 CHMP1BQ7LBR1 199 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 ATP6V1C2Q8NEY4 427 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 UPRTQ96BW1 309 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 BHLHE41Q9C0J9 482 aaPredicted RBP13.11□□□□□ -0.31
SF1-202ENST00000334944 C1GALT1Q9NS00 363 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 NDRG2Q9UN36 371 aaKnown RBP13.11□□□□□ -0.31
SF1-202ENST00000334944 GPR37L1O60883 481 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 SYPP08247 313 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 HOXD4P09016 255 aaPredicted RBP13.11□□□□□ -0.31
SF1-202ENST00000334944 ACADMP11310 421 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 MAT2AP31153 395 aaKnown RBP13.11□□□□□ -0.31
SF1-202ENST00000334944 RPA4Q13156 261 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 TEX261Q6UWH6 196 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 LGI4Q8N135 537 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 SLC37A3Q8NCC5 494 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 WDR36Q8NI36 951 aaKnown RBP13.11□□□□□ -0.31
SF1-202ENST00000334944 WFIKKN2Q8TEU8 576 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 RAD51AP1Q96B01 352 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms