RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 UNQ6494/PRO21346Q6UXR6 183 aa20.02■□□□□ 0.79
TPM1-204ENST00000334895 WDR53Q7Z5U6 358 aaPredicted RBP20.02■□□□□ 0.79
TPM1-204ENST00000334895 HORMAD2Q8N7B1 307 aa20.02■□□□□ 0.79
TPM1-204ENST00000334895 FAM156AQ8NDB6 213 aa20.02■□□□□ 0.79
TPM1-204ENST00000334895 DAZLQ92904 295 aaKnown RBP20.02■□□□□ 0.79
TPM1-204ENST00000334895 YIPF4Q9BSR8 244 aa20.02■□□□□ 0.79
TPM1-204ENST00000334895 NUDT9Q9BW91 350 aa20.02■□□□□ 0.79
TPM1-204ENST00000334895 DTX4Q9Y2E6 619 aa20.02■□□□□ 0.79
TPM1-204ENST00000334895 IGF2RP11717 2491 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 A0A1W2PQ72 361 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 IGHEP01854 428 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 COX6A1P12074 109 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 MAN2A2P49641 1150 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 GSK3BP49841 420 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 EEFSECP57772 596 aaKnown RBP20.01■□□□□ 0.79
TPM1-204ENST00000334895 SSPNQ14714 243 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 SAMD4BQ5PRF9 694 aaKnown RBP20.01■□□□□ 0.79
TPM1-204ENST00000334895 BHLHB9Q6PI77 547 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 ULK2Q8IYT8 1036 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 MORN4Q8NDC4 146 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 FBXO30Q8TB52 745 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 OTUB1Q96FW1 271 aaPredicted RBP20.01■□□□□ 0.79
TPM1-204ENST00000334895 ECSITQ9BQ95 431 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 OR10A5Q9H207 317 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 PIF1Q9H611 641 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 BCAP29Q9UHQ4 241 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 KCND3Q9UK17 655 aa20.01■□□□□ 0.79
TPM1-204ENST00000334895 PPIEQ9UNP9 301 aaKnown RBP20.01■□□□□ 0.79
TPM1-204ENST00000334895 APC2O95996 2303 aa20■□□□□ 0.79
TPM1-204ENST00000334895 IGHV1-45A0A0A0MS14 117 aa20■□□□□ 0.79
TPM1-204ENST00000334895 TNFRSF21O75509 655 aa20■□□□□ 0.79
TPM1-204ENST00000334895 LIFP15018 202 aa20■□□□□ 0.79
TPM1-204ENST00000334895 OTX2P32243 289 aa20■□□□□ 0.79
TPM1-204ENST00000334895 MSX2P35548 267 aaPredicted RBP20■□□□□ 0.79
TPM1-204ENST00000334895 CRATP43155 626 aa20■□□□□ 0.79
TPM1-204ENST00000334895 SLC37A1P57057 533 aa20■□□□□ 0.79
TPM1-204ENST00000334895 FADDQ13158 208 aa20■□□□□ 0.79
TPM1-204ENST00000334895 SRSF6Q13247 344 aaKnown RBP20■□□□□ 0.79
TPM1-204ENST00000334895 ADRM1Q16186 407 aa20■□□□□ 0.79
TPM1-204ENST00000334895 TNFAIP8L2Q6P589 184 aaPredicted RBP20■□□□□ 0.79
TPM1-204ENST00000334895 VASH2Q86V25 355 aa20■□□□□ 0.79
TPM1-204ENST00000334895 HPS6Q86YV9 775 aa20■□□□□ 0.79
TPM1-204ENST00000334895 ARHGAP24Q8N264 748 aa20■□□□□ 0.79
TPM1-204ENST00000334895 OR7G1Q8NGA0 311 aa20■□□□□ 0.79
TPM1-204ENST00000334895 OR11G2Q8NGC1 345 aa20■□□□□ 0.79
TPM1-204ENST00000334895 OR5D16Q8NGK9 328 aa20■□□□□ 0.79
TPM1-204ENST00000334895 OR1N1Q8NGS0 311 aa20■□□□□ 0.79
TPM1-204ENST00000334895 C16orf52Q8NHV5 167 aa20■□□□□ 0.79
TPM1-204ENST00000334895 MIPOL1Q8TD10 442 aa20■□□□□ 0.79
TPM1-204ENST00000334895 MCUR1Q96AQ8 359 aa20■□□□□ 0.79
TPM1-204ENST00000334895 LPAR4Q99677 370 aa20■□□□□ 0.79
TPM1-204ENST00000334895 ZNF700Q9H0M5 742 aa20■□□□□ 0.79
TPM1-204ENST00000334895 OR51I1Q9H343 314 aa20■□□□□ 0.79
TPM1-204ENST00000334895 ALG2Q9H553 416 aa20■□□□□ 0.79
TPM1-204ENST00000334895 GPN2Q9H9Y4 310 aaPredicted RBP20■□□□□ 0.79
TPM1-204ENST00000334895 ZNF223Q9UK11 482 aaPredicted RBP20■□□□□ 0.79
TPM1-204ENST00000334895 CORO2BQ9UQ03 480 aa20■□□□□ 0.79
TPM1-204ENST00000334895 HEMK1Q9Y5R4 338 aaPredicted RBP20■□□□□ 0.79
TPM1-204ENST00000334895 TPRP12270 2363 aaKnown RBP20■□□□□ 0.79
TPM1-204ENST00000334895 PCDH17O14917 1159 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 DYRK3O43781 588 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 PRAMEF2O60811 474 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 COQ9O75208 318 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 BMP2P12643 396 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 MATN1P21941 496 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 MAP3K8P41279 467 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 CLN3Q13286 438 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 NET1Q7Z628 596 aaPredicted RBP19.99■□□□□ 0.79
TPM1-204ENST00000334895 SERPINA11Q86U17 422 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 IFNEQ86WN2 208 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 PTOV1Q86YD1 416 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 FBXW8Q8N3Y1 598 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 APCDD1LQ8NCL9 501 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 B3GNT7Q8NFL0 401 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 HOXB13Q92826 284 aaPredicted RBP19.99■□□□□ 0.79
TPM1-204ENST00000334895 NCLNQ969V3 563 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 VSTM2LQ96N03 204 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 ACTRT3Q9BYD9 372 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 RAD21L1Q9H4I0 556 aa19.99■□□□□ 0.79
TPM1-204ENST00000334895 HMGN4O00479 90 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 ACP2P11117 423 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 HSD17B1P14061 328 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 TCN1P20061 433 aaPredicted RBP19.98■□□□□ 0.79
TPM1-204ENST00000334895 SLC26A5P58743 744 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 SLC16A11Q8NCK7 471 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 ADAMTS17Q8TE56 1095 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 RAB8BQ92930 207 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 ART5Q96L15 291 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 IMMP1LQ96LU5 166 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 SEMA4CQ9C0C4 833 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 MMADHCQ9H3L0 296 aaPredicted RBP19.98■□□□□ 0.79
TPM1-204ENST00000334895 CCDC86Q9H6F5 360 aaKnown RBP19.98■□□□□ 0.79
TPM1-204ENST00000334895 FOLH1BQ9HBA9 442 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 SLC7A8Q9UHI5 535 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 AP3M1Q9Y2T2 418 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 KCNE3Q9Y6H6 103 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 CREG1O75629 220 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 BCAS2O75934 225 aaPredicted RBP19.98■□□□□ 0.79
TPM1-204ENST00000334895 OR12D1P0DN82 309 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 SOX11P35716 441 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms