RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 OR8D4Q8NGM9 314 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 OR52P1PQ8NH57 321 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 UBASH3BQ8TF42 649 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 ZNF707Q96C28 371 aaPredicted RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 LRIG1Q96JA1 1093 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 SLC35G5Q96KT7 338 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 NECTIN4Q96NY8 510 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 KLHL31Q9H511 634 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 EPHX3Q9H6B9 360 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 XKR8Q9H6D3 395 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 ZCCHC3Q9NUD5 404 aaKnown RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 AHSPQ9NZD4 102 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 COMMD3Q9UBI1 195 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 TESQ9UGI8 421 aaKnown RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 ACAD8Q9UKU7 415 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 NTNG1Q9Y2I2 539 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 DVL2O14641 736 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 RGS13O14921 159 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 GUCY1B2O75343 617 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 RAB36O95755 333 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 TSPAN19P0C672 248 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 CXCR2P25025 360 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 APEX1P27695 318 aaKnown RBP11.61□□□□□ -0.55
VPS33B-201ENST00000333371 MAPK9P45984 424 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 CD83Q01151 205 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 LASP1Q14847 261 aaKnown RBP11.61□□□□□ -0.55
VPS33B-201ENST00000333371 FNDC3BQ53EP0 1204 aaKnown RBP11.61□□□□□ -0.55
VPS33B-201ENST00000333371 PYDC2Q56P42 97 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 Q5BKY6 102 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 TYW3Q6IPR3 259 aaKnown RBP11.61□□□□□ -0.55
VPS33B-201ENST00000333371 PAMR1Q6UXH9 720 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 PDZD3Q86UT5 571 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 TRIM69Q86WT6 500 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 GALNT12Q8IXK2 581 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 ATP6V1C2Q8NEY4 427 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 NLGN4YQ8NFZ3 816 aaPredicted RBP11.61□□□□□ -0.55
VPS33B-201ENST00000333371 UBE2E3Q969T4 207 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 C16orf58Q96GQ5 468 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 ZNF607Q96SK3 696 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 DPH7Q9BTV6 452 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 KATNB1Q9BVA0 655 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 ZCCHC2Q9C0B9 1178 aaKnown RBP11.61□□□□□ -0.55
VPS33B-201ENST00000333371 NDEL1Q9GZM8 345 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 OTOL1A6NHN0 477 aaPredicted RBP11.61□□□□□ -0.55
VPS33B-201ENST00000333371 C4orf51C9J302 202 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 SCAMP1O15126 338 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 NDUFS4O43181 175 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 CISD3P0C7P0 127 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 FABP5Q01469 135 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.61□□□□□ -0.55
VPS33B-201ENST00000333371 OCLNQ16625 522 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 ZNF793Q6ZN11 406 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 SLC30A8Q8IWU4 369 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 FAM26EQ8N5C1 309 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 MORN4Q8NDC4 146 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 SETD7Q8WTS6 366 aaKnown RBP11.61□□□□□ -0.55
VPS33B-201ENST00000333371 RNFT2Q96EX2 444 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 TMEM246Q9BRR3 403 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 OR2B2Q9GZK3 357 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 NEUROD4Q9HD90 331 aa11.61□□□□□ -0.55
VPS33B-201ENST00000333371 DIMT1Q9UNQ2 313 aaKnown RBP11.61□□□□□ -0.55
VPS33B-201ENST00000333371 GPR55Q9Y2T6 319 aaPredicted RBP11.61□□□□□ -0.55
VPS33B-201ENST00000333371 IQCMA0A1B0GVH7 501 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 ANKRD34BA5PLL1 514 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 CENPXA8MT69 81 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 C5orf67F2Z3F1 127 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 PLA2G10O15496 165 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 PDE9AO76083 593 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 RB1P06400 928 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 ADRB3P13945 408 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 CPEP16870 476 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 KELP23276 732 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 KIR2DL3P43628 341 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 LBX1P52954 281 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 P2RY14Q15391 338 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 NDUFAF5Q5TEU4 345 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 B3GLCTQ6Y288 498 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 LINC01555Q8NAE3 123 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 SETD6Q8TBK2 473 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 ZBED6CLQ96FA7 236 aaPredicted RBP11.6□□□□□ -0.55
VPS33B-201ENST00000333371 WDFY2Q96P53 400 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 AIF1LQ9BQI0 150 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 POLDIP3Q9BY77 421 aaKnown RBP11.6□□□□□ -0.55
VPS33B-201ENST00000333371 EQTNQ9NQ60 294 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 P2RX2Q9UBL9 471 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 NDRG2Q9UN36 371 aaKnown RBP11.6□□□□□ -0.55
VPS33B-201ENST00000333371 A0A1W2PPV9 198 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 B4DXG7 233 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 PGRMC2O15173 223 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 PCCBP05166 539 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 EIF2S1P05198 315 aaKnown RBP11.6□□□□□ -0.55
VPS33B-201ENST00000333371 EN2P19622 333 aaPredicted RBP11.6□□□□□ -0.55
VPS33B-201ENST00000333371 NCBP2P52298 156 aaKnown RBP eCLIP11.6□□□□□ -0.55
VPS33B-201ENST00000333371 SCN1BQ07699 218 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.6□□□□□ -0.55
VPS33B-201ENST00000333371 PDZK1Q5T2W1 519 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 GDPGP1Q6ZNW5 385 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 PRICKLE2Q7Z3G6 844 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 LAPTM4BQ86VI4 370 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 OR4F15Q8NGB8 312 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms