RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 RELNP78509 3460 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 VSTM2BA6NLU5 285 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 MYO1GB0I1T2 1018 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 ZNF888P0CJ79 500 aaPredicted RBP15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 RAP2AP10114 183 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 NR2F6P10588 404 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 BMP2P12643 396 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 CSNK2A2P19784 350 aaPredicted RBP15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 FASP25445 335 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 OTX2P32243 289 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 CHI3L1P36222 383 aaPredicted RBP15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 CHRNB3Q05901 458 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 ATP1A4Q13733 1029 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 FAM53BQ14153 422 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 ZNF630Q2M218 657 aaPredicted RBP15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 MPEG1Q2M385 716 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 TBCELQ5QJ74 424 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 OGFRL1Q5TC84 451 aaPredicted RBP15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 OR52E8Q6IFG1 317 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 PPP1R32Q7Z5V6 425 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 PDSS2Q86YH6 399 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 ADGRG5Q8IZF4 528 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 C11orf65Q8NCR3 313 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 LSM14AQ8ND56 463 aaKnown RBP15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 OR2Y1Q8NGV0 311 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 SFXN5Q8TD22 340 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 FAM162AQ96A26 154 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 COL26A1Q96A83 441 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 NEURL3Q96EH8 262 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 BBS4Q96RK4 519 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 ARHGAP9Q9BRR9 750 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 RPF2Q9H7B2 306 aaKnown RBP15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 TEX10Q9NXF1 929 aaPredicted RBP15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 GPN3Q9UHW5 284 aaPredicted RBP15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 RIMS3Q9UJD0 308 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 CNTRLQ7Z7A1 2325 aa15.38■□□□□ 0.05
PDLIM1-201ENST00000329399 A0A1W2PR48 441 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 OR2W5A6NFC9 320 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 ARGFXA6NJG6 315 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 C4orf51C9J302 202 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 IFNA14P01570 189 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 RAB8AP61006 207 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 TNFRSF17Q02223 184 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 TRIP10Q15642 601 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 DNAJC9Q8WXX5 260 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 FIG4Q92562 907 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 CIDECQ96AQ7 238 aaPredicted RBP15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 SLCO4A1Q96BD0 722 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 MMABQ96EY8 250 aaPredicted RBP15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 ABHD17AQ96GS6 310 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 ZNF184Q99676 751 aaPredicted RBP15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 TRIM8Q9BZR9 551 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 SLC26A1Q9H2B4 701 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 ZNF71Q9NQZ8 489 aaPredicted RBP15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 CES1P1Q9UKY3 287 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 DAPP1Q9UN19 280 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 ATG4BQ9Y4P1 393 aa15.37■□□□□ 0.05
PDLIM1-201ENST00000329399 JRKO75564 520 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 BMP10O95393 424 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 PDGFAP04085 211 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 ACADSP16219 412 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 CPN2P22792 545 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 CERS1P27544 350 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 PPP2R1BP30154 601 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 PCGF2P35227 344 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 HSPA13P48723 471 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 SSPNQ14714 243 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 COLEC12Q5KU26 742 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 SAXO2Q658L1 398 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 MRGPREQ86SM8 312 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 ZZZ3Q8IYH5 903 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 ANKFN1Q8N957 763 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 TMEM102Q8N9M5 508 aaPredicted RBP15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 ZCCHC10Q8TBK6 192 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 STT3BQ8TCJ2 826 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 NRG4Q8WWG1 115 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 TANKQ92844 425 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 EXOSC8Q96B26 276 aaKnown RBP15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 PPWD1Q96BP3 646 aaKnown RBP15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 AURKBQ96GD4 344 aaPredicted RBP15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 CENPNQ96H22 339 aaPredicted RBP15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 EPS8L2Q9H6S3 715 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 ANKHQ9HCJ1 492 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 KCMF1Q9P0J7 381 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 FAF1Q9UNN5 650 aaPredicted RBP15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 ERVK-11Q9UQG0 969 aa15.36■□□□□ 0.05
PDLIM1-201ENST00000329399 SGK494L7N484 410 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 GALR3O60755 368 aaPredicted RBP15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 ALOX12BO75342 701 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 SOX30O94993 753 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 AIFM1O95831 613 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 ALBP02768 609 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 ZGLP1P0C6A0 271 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 FOLR3P41439 243 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 PRIM2P49643 509 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 CCL11P51671 97 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 KCNAB2Q13303 367 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 BIKQ13323 160 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 GNA13Q14344 377 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 GCNT6Q5T4J0 391 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms