RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 IL20RBQ6UXL0 311 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 DEF8Q6ZN54 512 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 KRT74Q7RTS7 529 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 GPR26Q8NDV2 337 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 MCCC2Q9HCC0 563 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 IFT46Q9NQC8 304 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 ZDHHC3Q9NYG2 299 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 ZNF624Q9P2J8 865 aaPredicted RBP12.08□□□□□ -0.48
CCDC60-201ENST00000327554 ACAD8Q9UKU7 415 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 PPIEQ9UNP9 301 aaKnown RBP12.08□□□□□ -0.48
CCDC60-201ENST00000327554 KIF26AQ9ULI4 1882 aaPredicted RBP12.07□□□□□ -0.48
CCDC60-201ENST00000327554 A0A1B0GVC2 190 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 IRGMA1A4Y4 181 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 A6NIN4 97 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 MPC1LP0DKB6 136 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 NAT2P11245 290 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 CELP19835 753 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 MMP11P24347 488 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 SLC1A3P43003 542 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 MTNR1AP48039 350 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 SLC11A2P49281 568 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 ZNF763Q0D2J5 394 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 RIPPLY1Q0D2K3 151 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 SP140Q13342 867 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 MINDY4Q4G0A6 757 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 ATP13A5Q4VNC0 1218 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 KIAA1211LQ6NV74 962 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 LYPD4Q6UWN0 246 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 CD300LDQ6UXZ3 194 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 KANSL1Q7Z3B3 1105 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 ZER1Q7Z7L7 766 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 OAFQ86UD1 273 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 ZNF687Q8N1G0 1237 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 UXS1Q8NBZ7 420 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 BEST4Q8NFU0 473 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 GTF3C2Q8WUA4 911 aaPredicted RBP12.07□□□□□ -0.48
CCDC60-201ENST00000327554 POF1BQ8WVV4 589 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 PDXPQ96GD0 296 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 OR4K3Q96R72 315 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 ABHD1Q96SE0 405 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 GPA33Q99795 319 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 C19orf43Q9BQ61 176 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 SAP130Q9H0E3 1048 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 LDAHQ9H6V9 325 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 PLXND1Q9Y4D7 1925 aa12.07□□□□□ -0.48
CCDC60-201ENST00000327554 SLC16A5O15375 505 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 NME6O75414 186 aaPredicted RBP12.06□□□□□ -0.48
CCDC60-201ENST00000327554 KLKB1P03952 638 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 GBAP04062 536 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 SDHBP21912 280 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 GIFP27352 417 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 RBMS1P29558 406 aaKnown RBP12.06□□□□□ -0.48
CCDC60-201ENST00000327554 THBS2P35442 1172 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 SOAT1P35610 550 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 MMP12P39900 470 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 PITPNBP48739 271 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 RPS13P62277 151 aaKnown RBP12.06□□□□□ -0.48
CCDC60-201ENST00000327554 LSM11P83369 360 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCDC60-201ENST00000327554 COX10Q12887 443 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 GRB14Q14449 540 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 HSD17B12Q53GQ0 312 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 TPGS1Q6ZTW0 290 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 CHST9Q7L1S5 443 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 GPR142Q7Z601 462 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 TSPAN33Q86UF1 283 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 RASGRP3Q8IV61 690 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 FTMTQ8N4E7 242 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 ADAMTS19Q8TE59 1207 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 ADAMTS14Q8WXS8 1223 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 SMG7Q92540 1137 aaKnown RBP12.06□□□□□ -0.48
CCDC60-201ENST00000327554 PLA2G12AQ9BZM1 189 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 HCN3Q9P1Z3 774 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 POMT2Q9UKY4 750 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 GPR52Q9Y2T5 361 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 HRH3Q9Y5N1 445 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 NUPL2O15504 423 aaKnown RBP12.06□□□□□ -0.48
CCDC60-201ENST00000327554 TOXO94900 526 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 EPHX1P07099 455 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 DRD2P14416 443 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 GJA5P36382 358 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 SLC6A11P48066 632 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 SELENOPP49908 381 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 SMSP52788 366 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 UAP1L1Q3KQV9 507 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 CLVS2Q5SYC1 327 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 RGS7BPQ6MZT1 257 aaPredicted RBP12.06□□□□□ -0.48
CCDC60-201ENST00000327554 PODNL1Q6PEZ8 512 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 LRFN4Q6PJG9 635 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 SLC36A4Q6YBV0 504 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 NLRC3Q7RTR2 1065 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 TECPR1Q7Z6L1 1165 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 CBARPQ8N350 705 aaPredicted RBP12.06□□□□□ -0.48
CCDC60-201ENST00000327554 OR2T35Q8NGX2 323 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 SLC38A5Q8WUX1 472 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 GIMAP1Q8WWP7 306 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 DACT3Q96B18 629 aaPredicted RBP12.06□□□□□ -0.48
CCDC60-201ENST00000327554 PPCDCQ96CD2 204 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 ZNF649Q9BS31 505 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 SARGQ9BW04 601 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 TM6SF2Q9BZW4 377 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms