RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 COMMD3Q9UBI1 195 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 CSNK1G3Q9Y6M4 447 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 APC2O95996 2303 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 C1orf226A1L170 272 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 BLOC1S5-TXNDC5H3BN57 136 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 MED26O95402 600 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 GRPRP30550 384 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 WNT3P56703 355 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 PRSS41Q7RTY9 318 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 IGFN1Q86VF2 1251 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 LRRC25Q8N386 305 aaPredicted RBP12.84□□□□□ -0.35
SRRM1-201ENST00000323848 TMEM27Q9HBJ8 222 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 C8orf4Q9NR00 106 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 SIRT5Q9NXA8 310 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 C2orf74A8MZ97 194 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 TMCC2O75069 709 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 GYPBP06028 91 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 ATP5A1P25705 553 aaKnown RBP12.84□□□□□ -0.35
SRRM1-201ENST00000323848 SOX3P41225 446 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 SMAD2Q15796 467 aaKnown RBP12.84□□□□□ -0.35
SRRM1-201ENST00000323848 FAM214AQ32MH5 1076 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 TMEM52BQ4KMG9 183 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 FAM71E1Q6IPT2 247 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 RNFT2Q96EX2 444 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 PPIL1Q9Y3C6 166 aa12.84□□□□□ -0.35
SRRM1-201ENST00000323848 LRIT2A6NDA9 550 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 CHURC1-FNTBB4DL54 471 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 C2CD4DB7Z1M9 353 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 PSMD9O00233 223 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 SOD1P00441 154 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 DCNP07585 359 aaKnown RBP12.83□□□□□ -0.36
SRRM1-201ENST00000323848 FHP07954 510 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 BMXP51813 675 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 CRISP1P54107 249 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 MLF2Q15773 248 aaPredicted RBP12.83□□□□□ -0.36
SRRM1-201ENST00000323848 TRMT12Q53H54 448 aaKnown RBP12.83□□□□□ -0.36
SRRM1-201ENST00000323848 CMPK2Q5EBM0 449 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 PRAMEF17Q5VTA0 474 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 OR5M10Q6IEU7 315 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 PHOSPHO1Q8TCT1 267 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 UBASH3BQ8TF42 649 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 ZFYVE21Q9BQ24 234 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 RNF167Q9H6Y7 350 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 EGLN3Q9H6Z9 239 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 SLAMF7Q9NQ25 335 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 TMEM184CQ9NVA4 438 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 ENOPH1Q9UHY7 261 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 ICKQ9UPZ9 632 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 WWP2O00308 870 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 PSMA1P25786 263 aaKnown RBP12.83□□□□□ -0.36
SRRM1-201ENST00000323848 GTF2E2P29084 291 aaKnown RBP12.83□□□□□ -0.36
SRRM1-201ENST00000323848 TUBA4AP68366 448 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 NFATC3Q12968 1075 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 KCNAB1Q14722 419 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 BCL7AQ4VC05 210 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 FLYWCH1Q4VC44 716 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 OR6T1Q8NGN1 323 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 OR51E2Q9H255 320 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 DHCR7Q9UBM7 475 aaKnown RBP12.83□□□□□ -0.36
SRRM1-201ENST00000323848 MKL2Q9ULH7 1088 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 KCNE3Q9Y6H6 103 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 KCNE1BA0A087WTH5 132 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 GFRA2O00451 464 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 BCAS1O75363 584 aaPredicted RBP12.83□□□□□ -0.36
SRRM1-201ENST00000323848 CPMP14384 443 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 PCGF2P35227 344 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 CLK3P49761 638 aaKnown RBP12.83□□□□□ -0.36
SRRM1-201ENST00000323848 NFATC4Q14934 902 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 GXYLT1Q4G148 440 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 ADAMTSL4Q6UY14 1074 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 ZNF675Q8TD23 568 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 GATAD2BQ8WXI9 593 aa12.83□□□□□ -0.36
SRRM1-201ENST00000323848 ZBTB20Q9HC78 741 aaPredicted RBP12.83□□□□□ -0.36
SRRM1-201ENST00000323848 DNAJC13O75165 2243 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 AGAP14A8MT82 685 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 LOC110117498-PIK3R3F6TDL0 507 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 CSTF2P33240 577 aaKnown RBP eCLIP12.82□□□□□ -0.36
SRRM1-201ENST00000323848 MRPS15P82914 257 aaKnown RBP12.82□□□□□ -0.36
SRRM1-201ENST00000323848 SPCS2Q15005 226 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 LRIT3Q3SXY7 679 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 FRMPD2BQ6IN97 320 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 TSSK4Q6SA08 328 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 ZNF433Q8N7K0 673 aaPredicted RBP12.82□□□□□ -0.36
SRRM1-201ENST00000323848 LGALS12Q96DT0 336 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 RNF6Q9Y252 685 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 EMC8O43402 210 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 UGT2B7P16662 529 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 CELP19835 753 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 GADD45AP24522 165 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 ZFP36L2P47974 494 aaKnown RBP12.82□□□□□ -0.36
SRRM1-201ENST00000323848 LSM11P83369 360 aaKnown RBP eCLIP12.82□□□□□ -0.362e-11■■□□□ 11.4
SRRM1-201ENST00000323848 ZNF57Q68EA5 555 aaPredicted RBP12.82□□□□□ -0.36
SRRM1-201ENST00000323848 ADAMTS16Q8TE57 1224 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 MAP3K3Q99759 626 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 SGPP1Q9BX95 441 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 DPH1Q9BZG8 443 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 HDHD2Q9H0R4 259 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 SSR3Q9UNL2 185 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 A0A1B0GVT2 93 aa12.82□□□□□ -0.36
SRRM1-201ENST00000323848 OPN1LWP04000 364 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms