RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 DHRSXQ8N5I4 330 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 RCBTB1Q8NDN9 531 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 GEMIN6Q8WXD5 167 aaKnown RBP17.22■□□□□ 0.35
USP39-201ENST00000323701 SLC9A6Q92581 669 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 EPB41L1Q9H4G0 881 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 C8orf4Q9NR00 106 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 THSD1Q9NS62 852 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 CUTCQ9NTM9 273 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 THUMPD1Q9NXG2 353 aaKnown RBP17.22■□□□□ 0.35
USP39-201ENST00000323701 USE1Q9NZ43 259 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 PDP1Q9P0J1 537 aaPredicted RBP17.22■□□□□ 0.35
USP39-201ENST00000323701 PDP2Q9P2J9 529 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 RHCGQ9UBD6 479 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 LYVE1Q9Y5Y7 322 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 ALAS2P22557 587 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 DNAJA1P31689 397 aaKnown RBP17.21■□□□□ 0.35
USP39-201ENST00000323701 CAPGP40121 348 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 XCR1P46094 333 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 KCNJ5P48544 419 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 ARL4DP49703 201 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 PDX1P52945 283 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 CRISP3P54108 245 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 CHRNEQ04844 493 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 GANABQ14697 944 aaKnown RBP17.21■□□□□ 0.35
USP39-201ENST00000323701 GRM7Q14831 915 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 AP1ARQ63HQ0 302 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 TCEAL6Q6IPX3 200 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 PRSS42Q7Z5A4 293 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 LSRQ86X29 649 aaPredicted RBP17.21■□□□□ 0.35
USP39-201ENST00000323701 OR51Q1Q8NH59 317 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 TCEAL3Q969E4 200 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 CTHRC1Q96CG8 243 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 BCL2L10Q9HD36 194 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 PTGFRNQ9P2B2 879 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 SEC14L3Q9UDX4 400 aa17.21■□□□□ 0.35
USP39-201ENST00000323701 ZNF749O43361 778 aa17.21■□□□□ 0.34
USP39-201ENST00000323701 PLOD3O60568 738 aa17.21■□□□□ 0.34
USP39-201ENST00000323701 SP9P0CG40 484 aa17.21■□□□□ 0.34
USP39-201ENST00000323701 S1PR1P21453 382 aa17.21■□□□□ 0.34
USP39-201ENST00000323701 FPR1P21462 350 aa17.21■□□□□ 0.34
USP39-201ENST00000323701 GCGRP47871 477 aa17.21■□□□□ 0.34
USP39-201ENST00000323701 GALNT5Q7Z7M9 940 aa17.21■□□□□ 0.34
USP39-201ENST00000323701 TSPYL5Q86VY4 417 aaPredicted RBP17.21■□□□□ 0.34
USP39-201ENST00000323701 HIPK1Q86Z02 1210 aa17.21■□□□□ 0.34
USP39-201ENST00000323701 ZBTB44Q8NCP5 570 aa17.21■□□□□ 0.34
USP39-201ENST00000323701 SDCCAG3Q96C92 435 aa17.21■□□□□ 0.34
USP39-201ENST00000323701 RBM4BQ9BQ04 359 aaKnown RBP17.21■□□□□ 0.34
USP39-201ENST00000323701 RBM4Q9BWF3 364 aaKnown RBP17.21■□□□□ 0.34
USP39-201ENST00000323701 REEP1Q9H902 201 aa17.21■□□□□ 0.34
USP39-201ENST00000323701 CBX7O95931 251 aa17.2■□□□□ 0.34
USP39-201ENST00000323701 HPRP00739 348 aa17.2■□□□□ 0.34
USP39-201ENST00000323701 SLC35E2P0CK97 266 aa17.2■□□□□ 0.34
USP39-201ENST00000323701 MYF6P23409 242 aa17.2■□□□□ 0.34
USP39-201ENST00000323701 EFNA3P52797 238 aa17.2■□□□□ 0.34
USP39-201ENST00000323701 MLIPQ5VWP3 458 aa17.2■□□□□ 0.34
USP39-201ENST00000323701 CDC73Q6P1J9 531 aa17.2■□□□□ 0.34
USP39-201ENST00000323701 PRR23CQ6ZRP0 262 aa17.2■□□□□ 0.34
USP39-201ENST00000323701 USP51Q70EK9 711 aa17.2■□□□□ 0.34
USP39-201ENST00000323701 VANGL1Q8TAA9 524 aaPredicted RBP17.2■□□□□ 0.34
USP39-201ENST00000323701 ADAMTS15Q8TE58 950 aa17.2■□□□□ 0.34
USP39-201ENST00000323701 GMEB2Q9UKD1 530 aa17.2■□□□□ 0.34
USP39-201ENST00000323701 CHST2Q9Y4C5 530 aa17.2■□□□□ 0.34
USP39-201ENST00000323701 TMEM247A6NEH6 219 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 ASNA1O43681 348 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 CDH12P55289 794 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 FAM214AQ32MH5 1076 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 EXOSC6Q5RKV6 272 aaKnown RBP17.19■□□□□ 0.34
USP39-201ENST00000323701 CCNJQ5T5M9 372 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 HEPHL1Q6MZM0 1159 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 ZNF605Q86T29 641 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 FAM181AQ8N9Y4 354 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 OR6C4Q8NGE1 309 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 OR4C15Q8NGM1 316 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 PIK3R3Q92569 461 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 ZNF501Q96CX3 271 aaPredicted RBP17.19■□□□□ 0.34
USP39-201ENST00000323701 MUS81Q96NY9 551 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 ZNF607Q96SK3 696 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 GTPBP2Q9BX10 602 aaKnown RBP17.19■□□□□ 0.34
USP39-201ENST00000323701 ALOXE3Q9BYJ1 711 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 GABARAPL1Q9H0R8 117 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 ZNF768Q9H5H4 540 aaKnown RBP17.19■□□□□ 0.34
USP39-201ENST00000323701 CXorf21Q9HAI6 301 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 ACER3Q9NUN7 267 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 RLIMQ9NVW2 624 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 FBXO34Q9NWN3 711 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 GIN1Q9NXP7 522 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 NDOR1Q9UHB4 597 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 ENPP4Q9Y6X5 453 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 CENPVL1A0A0U1RR11 272 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 ANKRD33BA6NCL7 494 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 A8MVJ9 347 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 M0R3H8 397 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 ARHGAP33O14559 1287 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 DPM1O60762 260 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 CTNSO60931 367 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 SEC24DO94855 1032 aaPredicted RBP17.19■□□□□ 0.34
USP39-201ENST00000323701 RPLP0P05388 317 aaKnown RBP17.19■□□□□ 0.34
USP39-201ENST00000323701 SMIM18P0DKX4 95 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 EPHA2P29317 976 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 MAGEA8P43361 318 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms