RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SMIM10Q96HG1 83 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 SERINC2Q96SA4 455 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 GAS2L1Q99501 681 aaPredicted RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 ROGDIQ9GZN7 287 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 BCL2L10Q9HD36 194 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 STARD5Q9NSY2 213 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 DNAAF2Q9NVR5 837 aaKnown RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 ZNF226Q9NYT6 803 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 SELENONQ9NZV5 590 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 PHF11Q9UIL8 331 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.11□□□□□ -1.27
IFT88-201ENST00000319980 A4GNTQ9UNA3 340 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 DUSP12Q9UNI6 340 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 ENTPD2Q9Y5L3 495 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 SCN3AQ9NY46 2000 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 MDC1Q14676 2089 aaKnown RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 KIR2DS5A0A0G2JLQ3 304 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 A0A0G2JNG1 304 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 A0A0G2JPF8 293 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 HNRNPCL2B2RXH8 293 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 HNRNPCL3B7ZW38 293 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 H3BN98 237 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 KIR2DS3K7RE56 304 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 FCMRO60667 390 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 LDB3O75112 727 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 BCL10O95999 233 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 LCKP06239 509 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 IGFBP1P08833 259 aaPredicted RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 HNRNPCL4P0DMR1 293 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 CNR2P34972 360 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 ENTPD1P49961 510 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 CRISP1P54107 249 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 CDC42P60953 191 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 LSM3P62310 102 aaKnown RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 UBE2IP63279 158 aaKnown RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 LSM11P83369 360 aaKnown RBP eCLIP7.11□□□□□ -1.27
IFT88-201ENST00000319980 TARDBPQ13148 414 aaKnown RBP eCLIP7.11□□□□□ -1.27
IFT88-201ENST00000319980 KIR2DS5Q14953 304 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 ZNF311Q5JNZ3 666 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 FAM111BQ6SJ93 734 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 SLC16A12Q6ZSM3 486 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 ABHD13Q7L211 337 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 SYT13Q7L8C5 426 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 C16orf62Q7Z3J2 963 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 SVOPQ8N4V2 548 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 DNAJC22Q8N4W6 341 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 TSTD1Q8NFU3 115 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 BAHD1Q8TBE0 780 aaPredicted RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 MIPOL1Q8TD10 442 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 ADAMTS15Q8TE58 950 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 ZFPM2Q8WW38 1151 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 SLC9A6Q92581 669 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 PSD2Q9BQI7 771 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 FNDC11Q9BVV2 318 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 PRR14Q9BWN1 585 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 COL25A1Q9BXS0 654 aaPredicted RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 GPN2Q9H9Y4 310 aaPredicted RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 LMAN1LQ9HAT1 526 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 GPR83Q9NYM4 423 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 ENOPH1Q9UHY7 261 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 NINQ8N4C6 2090 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 CCDC88CQ9P219 2028 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 A0A1W2PPC4 97 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 ARRDC5A6NEK1 342 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 OR5K4A6NMS3 321 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 CLCA1A8K7I4 914 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 B4DGG1 531 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 DLL1O00548 723 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 TOR1BO14657 336 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 FRS3O43559 492 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 LGI1O95970 557 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 ADAP00813 363 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 IGLV3-19P01714 112 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 SRFP11831 508 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 ZNF10P21506 573 aaPredicted RBP7.1□□□□□ -1.27
IFT88-201ENST00000319980 ST13P50502 369 aaKnown RBP7.1□□□□□ -1.27
IFT88-201ENST00000319980 FOXK1P85037 733 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 OCA2Q04671 838 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 AQP6Q13520 282 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 DCTN2Q13561 401 aaKnown RBP7.1□□□□□ -1.27
IFT88-201ENST00000319980 GAS6Q14393 721 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 SPCS2Q15005 226 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 CTF1Q16619 201 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 SYT6Q5T7P8 510 aaPredicted RBP7.1□□□□□ -1.27
IFT88-201ENST00000319980 ATAD3BQ5T9A4 648 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 PTCHD4Q6ZW05 846 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 ANKRD13BQ86YJ7 626 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 OR5T3Q8NGG3 340 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 RSC1A1Q92681 617 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 GGHQ92820 318 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 KLHDC7BQ96G42 594 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 SLC6A18Q96N87 628 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 PHF7Q9BWX1 381 aaPredicted RBP7.1□□□□□ -1.27
IFT88-201ENST00000319980 ACTRT3Q9BYD9 372 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 UCK2Q9BZX2 261 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 TWSG1Q9GZX9 223 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 SLC38A1Q9H2H9 487 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 MS4A12Q9NXJ0 267 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 PSORS1C1Q9UIG5 152 aa7.1□□□□□ -1.27
IFT88-201ENST00000319980 ENPP5Q9UJA9 477 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms