RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TRBV4-1A0A0J9YWV2 114 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 GPR171O14626 319 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 GJB3O75712 270 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SOX14O95416 240 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CLDN7O95471 211 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 NFATC1O95644 943 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SLC10A3P09131 477 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ALPIP09923 528 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 FURINP09958 794 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ATP1B2P14415 290 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CORO1AP31146 461 aaKnown RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 GRK4P32298 578 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 HNF1BP35680 557 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CTBP2P56545 445 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PFN3P60673 137 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 GMFBP60983 142 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ARF5P84085 180 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 TSPAN31Q12999 210 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PUM1Q14671 1186 aaKnown RBP eCLIP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 TRAM2Q15035 370 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF311Q5JNZ3 666 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CEACAM20Q6UY09 585 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 MBOAT1Q6ZNC8 495 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SLCO4C1Q6ZQN7 724 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ZER1Q7Z7L7 766 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 DNAJC5GQ8N7S2 189 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SAMD12Q8N8I0 201 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 APOBEC4Q8WW27 367 aaKnown RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ST8SIA4Q92187 359 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 EID2BQ96D98 161 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CACYBPQ9HB71 228 aaKnown RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ACSS1Q9NUB1 689 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 GPATCH2Q9NW75 528 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 POMT2Q9UKY4 750 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 GABRPO00591 440 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ECDO95905 644 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SAGP10523 405 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 HOXB1P14653 301 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF8P17098 575 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SSTR4P31391 388 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CDK5Q00535 292 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 FLI1Q01543 452 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CAMK2DQ13557 499 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 MPP7Q5T2T1 576 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF697Q5TEC3 545 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 KIAA1161Q6NSJ0 714 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ASB18Q6ZVZ8 466 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SLC24A5Q71RS6 500 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 TSPAN33Q86UF1 283 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 DENND1CQ8IV53 801 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 TEX19Q8NA77 164 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 GPR26Q8NDV2 337 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 GPR156Q8NFN8 814 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 OR56A3Q8NH54 315 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 NECTIN4Q96NY8 510 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SMIM14Q96QK8 99 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 OR51B5Q9H339 312 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 RERGLQ9H628 205 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ERVMER34-1Q9H9K5 563 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 LSM7Q9UK45 103 aaKnown RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CD160O95971 181 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 C1GALT1C1LP0DN25 315 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PSMB1P20618 241 aaKnown RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CD52P31358 61 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 RECQLP46063 649 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 OR1G1P47890 313 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ARPP19P56211 112 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 MRPL58Q14197 206 aaKnown RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 GAS6Q14393 721 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 NFE2L1Q14494 772 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF273Q14593 569 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CCDC157Q569K6 752 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ZFP64Q9NPA5 681 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 IMP3Q9NV31 184 aaKnown RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 STOX2Q9P2F5 926 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 P2RX2Q9UBL9 471 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CPA4Q9UI42 421 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SPATA2Q9UM82 520 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PPIL1Q9Y3C6 166 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 COL11A2P13942 1736 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CCL15-CCL14A0A0B4J2E2 113 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 YY2O15391 372 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 HPGDSO60760 199 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PRAMEF4O60810 478 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 APOL3O95236 402 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 GIPP09681 153 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CPN1P15169 458 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 TYRP1P17643 537 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ST3GAL3Q11203 375 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 OPCMLQ14982 345 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 P2RY14Q15391 338 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CCL15Q16663 113 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF648Q5T619 568 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 IDNKQ5T6J7 187 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PRAMEF9Q5VWM5 478 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SPICQ8N5J4 248 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 EIF4E3Q8N5X7 224 aaKnown RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF366Q8N895 744 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SETD7Q8WTS6 366 aaKnown RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 OSTF1Q92882 214 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms