RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 BCAP29Q9UHQ4 241 aa15.92■□□□□ 0.14
EXOSC4-201ENST00000316052 MBD3L4A6NDZ8 208 aaPredicted RBP15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 MBD3L3A6NE82 208 aaPredicted RBP15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 MBD3L5A6NJ08 208 aaPredicted RBP15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 ICOSLGO75144 302 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 ERAL1O75616 437 aaKnown RBP15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 CBX7O95931 251 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 PDYNP01213 254 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 ATP1B1P05026 303 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 NAGAP17050 411 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 KRT15P19012 456 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 TSPAN8P19075 237 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 DNASE1P24855 282 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 CTSSP25774 331 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 SLCO1A2P46721 670 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 SF3B4Q15427 424 aaKnown RBP eCLIP15.91■□□□□ 0.148e-7■■■■□ 23.2
EXOSC4-201ENST00000316052 KRTAP21-3Q3LHN1 58 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 GGTA1PQ4G0N0 100 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 LETMD1Q6P1Q0 360 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 NUP54Q7Z3B4 507 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 TMEM151AQ8N4L1 468 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 C9orf106Q8NAJ2 232 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 CHDHQ8NE62 594 aaPredicted RBP15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 OR1J4Q8NGS1 313 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 GOT1L1Q8NHS2 421 aaPredicted RBP15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 MBD3L2Q8NHZ7 208 aaPredicted RBP15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 LINC01560Q8TB33 94 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 OMA1Q96E52 524 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 LRRC46Q96FV0 321 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 LCORQ96JN0 433 aaPredicted RBP15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 FUT8Q9BYC5 575 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 ELOVL6Q9H5J4 265 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 CALHM2Q9HA72 323 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 EHD3Q9NZN3 535 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 JKAMPQ9P055 326 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 FETUBQ9UGM5 382 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 FOXD3Q9UJU5 478 aaPredicted RBP15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 ZNF225Q9UK10 706 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 SLC12A4Q9UP95 1085 aa15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
EXOSC4-201ENST00000316052 C1orf226A1L170 272 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 TUBAL3A6NHL2 446 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 SNPHO15079 494 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 UGT2B11O75310 529 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 RPS17P08708 135 aaKnown RBP15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 SBK3P0C264 359 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 EPXP11678 715 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 CSNK2A2P19784 350 aaPredicted RBP15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 CNTFP26441 200 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 PHBP35232 272 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 CDH13P55290 713 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 FOXF2Q12947 444 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 FOXD4Q12950 439 aaPredicted RBP15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 LTB4RQ15722 352 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 TRMT12Q53H54 448 aaKnown RBP15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 C10orf62Q5T681 223 aaPredicted RBP15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 C6orf163Q5TEZ5 329 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 SLC30A6Q6NXT4 461 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 TMEM81Q6P7N7 255 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 PLXDC2Q6UX71 529 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 WDSUB1Q8N9V3 476 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 ZPLD1Q8TCW7 415 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 CTHRC1Q96CG8 243 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 CNRIP1Q96F85 164 aaPredicted RBP15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 ZNF681Q96N22 645 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 SERHLQ9NQF3 203 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 TMCO1Q9UM00 188 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 PLLPQ9Y342 182 aa15.9■□□□□ 0.14
EXOSC4-201ENST00000316052 PCNX3Q9H6A9 2034 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 GOLGA6L10A6NI86 522 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 ZNF500O60304 480 aaPredicted RBP15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 SMIM24O75264 130 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 CDH16O75309 829 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 GUCY1B2O75343 617 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 PCSK2P16519 638 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 EMDP50402 254 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 RELL1Q8IUW5 271 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 OR52R1Q8NGF1 315 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 ZNF483Q8TF39 744 aaPredicted RBP15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 SELENOMQ8WWX9 145 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 KLHL29Q96CT2 875 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 HBEGFQ99075 208 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 TUBA1CQ9BQE3 449 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 ANKRA2Q9H9E1 313 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 HEY2Q9UBP5 337 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 MAPRE3Q9UPY8 281 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 EXO1Q9UQ84 846 aaKnown RBP15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 CFL2Q9Y281 166 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 ARID1AO14497 2285 aa15.89■□□□□ 0.13
EXOSC4-201ENST00000316052 EEF1E1-BLOC1S5C9J1V9 151 aa15.88■□□□□ 0.13
EXOSC4-201ENST00000316052 ACOX3O15254 700 aa15.88■□□□□ 0.13
EXOSC4-201ENST00000316052 EEF1E1O43324 174 aaKnown RBP15.88■□□□□ 0.13
EXOSC4-201ENST00000316052 NME6O75414 186 aaPredicted RBP15.88■□□□□ 0.13
EXOSC4-201ENST00000316052 IL18BPO95998 194 aa15.88■□□□□ 0.13
EXOSC4-201ENST00000316052 ACTL6AO96019 429 aa15.88■□□□□ 0.13
EXOSC4-201ENST00000316052 INHBAP08476 426 aa15.88■□□□□ 0.13
EXOSC4-201ENST00000316052 COL6A2P12110 1019 aa15.88■□□□□ 0.13
EXOSC4-201ENST00000316052 CPN1P15169 458 aa15.88■□□□□ 0.13
EXOSC4-201ENST00000316052 HOXB4P17483 251 aaPredicted RBP15.88■□□□□ 0.13
EXOSC4-201ENST00000316052 DRD5P21918 477 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms