RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PIN1Q13526 163 aaPredicted RBP17.22■□□□□ 0.35
CCDC43-201ENST00000315286 PRAMEF8Q5VWM4 474 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 PRAMEF7Q5VXH5 474 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 MFSD12Q6NUT3 480 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 IQCHQ86VS3 1027 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 GKN2Q86XP6 184 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 OR2L13Q8N349 312 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 C19orf47Q8N9M1 422 aaKnown RBP17.22■□□□□ 0.35
CCDC43-201ENST00000315286 AVL9Q8NBF6 648 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 SLC16A11Q8NCK7 471 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 ADAMTS15Q8TE58 950 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 CDX2Q99626 313 aaPredicted RBP17.22■□□□□ 0.35
CCDC43-201ENST00000315286 NAA50Q9GZZ1 169 aaKnown RBP17.22■□□□□ 0.35
CCDC43-201ENST00000315286 GIN1Q9NXP7 522 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 SCN3BQ9NY72 215 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 TMCC3Q9ULS5 477 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 A4GNTQ9UNA3 340 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 LIPT1Q9Y234 373 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 THADAQ6YHU6 1953 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 A0A1W2PPC1 479 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 SGK494L7N484 410 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 ZNF701M0R085 212 aaPredicted RBP17.21■□□□□ 0.35
CCDC43-201ENST00000315286 FGF17O60258 216 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 PCMT1P22061 227 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 KRT20P35900 424 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 ROR2Q01974 943 aaKnown RBP17.21■□□□□ 0.35
CCDC43-201ENST00000315286 NPTX1Q15818 432 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 TRMT12Q53H54 448 aaKnown RBP17.21■□□□□ 0.35
CCDC43-201ENST00000315286 GTF2IRD2BQ6EKJ0 949 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 GTF2IRD2Q86UP8 949 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 CA13Q8N1Q1 262 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 OR6T1Q8NGN1 323 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 HSPA12BQ96MM6 686 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 MS4A4EQ96PG1 132 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 TRNT1Q96Q11 434 aaKnown RBP17.21■□□□□ 0.35
CCDC43-201ENST00000315286 NELL2Q99435 816 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 PCED1AQ9H1Q7 454 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 SPACA6W5XKT8 324 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 TMEM131Q92545 1883 aa17.21■□□□□ 0.35
CCDC43-201ENST00000315286 DCST1Q5T197 706 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 ATAD3BQ5T9A4 648 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 KLHL17Q6TDP4 642 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 C16orf62Q7Z3J2 963 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 ERI1Q8IV48 349 aaKnown RBP17.2■□□□□ 0.34
CCDC43-201ENST00000315286 MCATQ8IVS2 390 aaKnown RBP17.2■□□□□ 0.34
CCDC43-201ENST00000315286 GJD3Q8N144 294 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 PARP8Q8N3A8 854 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 ZNF420Q8TAQ5 688 aaPredicted RBP17.2■□□□□ 0.34
CCDC43-201ENST00000315286 FAM81AQ8TBF8 368 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 CNDP2Q96KP4 475 aaKnown RBP17.2■□□□□ 0.34
CCDC43-201ENST00000315286 DNAAF2Q9NVR5 837 aaKnown RBP17.2■□□□□ 0.34
CCDC43-201ENST00000315286 SLC9A8Q9Y2E8 581 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 DSPPQ9NZW4 1301 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 FCMRO60667 390 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 FAM20BO75063 409 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 ZIC2O95409 532 aaPredicted RBP17.2■□□□□ 0.34
CCDC43-201ENST00000315286 IDH2P48735 452 aaKnown RBP17.2■□□□□ 0.34
CCDC43-201ENST00000315286 EMX1Q04741 257 aaPredicted RBP17.2■□□□□ 0.34
CCDC43-201ENST00000315286 FAM214AQ32MH5 1076 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 ZNF628Q5EBL2 1059 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 HEPHL1Q6MZM0 1159 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 CDC73Q6P1J9 531 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 Q7L0L9 218 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 NLGN4XQ8N0W4 816 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 SPEM1Q8N4L4 309 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 ARHGEF39Q8N4T4 335 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 ZNF540Q8NDQ6 660 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 DOK1Q99704 481 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 MAP3K3Q99759 626 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 PINK1Q9BXM7 581 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 PTGFRNQ9P2B2 879 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 PCDH15Q96QU1 1955 aa17.2■□□□□ 0.34
CCDC43-201ENST00000315286 DUXAA6NLW8 204 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 STK25O00506 426 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 CASC3O15234 703 aaKnown RBP17.19■□□□□ 0.34
CCDC43-201ENST00000315286 GPR75O95800 540 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 PDX1P52945 283 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 SH3BGRP55822 239 aaPredicted RBP17.19■□□□□ 0.34
CCDC43-201ENST00000315286 TUBA3CQ13748 450 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 PTGES3Q15185 160 aaKnown RBP17.19■□□□□ 0.34
CCDC43-201ENST00000315286 ZNF311Q5JNZ3 666 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 KLHL35Q6PF15 583 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 VRK2Q86Y07 508 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 OR9A4Q8NGU2 314 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 RHOXF1Q8NHV9 184 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 C1orf216Q8TAB5 229 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 SLC7A13Q8TCU3 470 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 SLC9A6Q92581 669 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 CDS1Q92903 461 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 MUL1Q969V5 352 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 SLC38A3Q99624 504 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 FUZQ9BT04 418 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 H3BMQ9 156 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 FAAHO00519 579 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 RDH16O75452 317 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 INMTO95050 263 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 ATE1O95260 518 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 ALPPP05187 535 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 PROS1P07225 676 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 CAPZBP47756 277 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms