RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ACTRT3Q9BYD9 372 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 OR2B2Q9GZK3 357 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 TP63Q9H3D4 680 aaPredicted RBP13.09□□□□□ -0.31
SPAST-201ENST00000315285 MTHFD2LQ9H903 347 aaPredicted RBP13.09□□□□□ -0.31
SPAST-201ENST00000315285 PAQR5Q9NXK6 330 aaPredicted RBP13.09□□□□□ -0.31
SPAST-201ENST00000315285 SCP2D1Q9UJQ7 156 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 HHLA1C9JL84 531 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 ZNF878C9JN71 531 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 TEX46H3BTG2 121 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 ALPLP05186 524 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 SPARCP09486 303 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 IL7P13232 177 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 CXCR4P61073 352 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 RAB30Q15771 203 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 LCTLQ6UWM7 567 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 KLHDC9Q8NEP7 349 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 CLCC1Q96S66 551 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 IL20RAQ9UHF4 553 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 USP22Q9UPT9 525 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 FARSAQ9Y285 508 aaKnown RBP13.08□□□□□ -0.32
SPAST-201ENST00000315285 CCDC85CA6NKD9 419 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 ACOT8O14734 319 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 ANXA3P12429 323 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 HOXC13P31276 330 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 ACTA2P62736 377 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 ACTG2P63267 376 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 TMEM69Q5SWH9 247 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 ZNF691Q5VV52 312 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 ALG1LQ6GMV1 187 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 SLC17A9Q9BYT1 436 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 MYNNQ9NPC7 610 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 A0A1B0GVI7 797 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 A0A1W2PQL4 384 aaPredicted RBP13.08□□□□□ -0.32
SPAST-201ENST00000315285 C9J4A7 227 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 M0R129 80 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 SMAD9O15198 467 aaKnown RBP13.08□□□□□ -0.32
SPAST-201ENST00000315285 IL1RNP18510 177 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 CA5AP35218 305 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 BMPR1AP36894 532 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 PRKCDQ05655 676 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 KCTD18Q6PI47 426 aaPredicted RBP13.08□□□□□ -0.32
SPAST-201ENST00000315285 MS4A15Q8N5U1 240 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 ANKK1Q8NFD2 765 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 SLC41A3Q96GZ6 507 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 METTL8Q9H825 291 aaKnown RBP13.08□□□□□ -0.32
SPAST-201ENST00000315285 METTL7AQ9H8H3 244 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 HCFC1R1Q9NWW0 138 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 HCSTQ9UBK5 93 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 AP1M2Q9Y6Q5 423 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 TRAPPC13A5PLN9 417 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 M0R233 179 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 S1PR1P21453 382 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 MAGEA8P43361 318 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 DEFA5Q01523 94 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 GLT8D1Q68CQ7 371 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 LIPIQ6XZB0 460 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 B3GNT7Q8NFL0 401 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 CMKLR1Q99788 373 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 SORBS1Q9BX66 1292 aaKnown RBP13.08□□□□□ -0.32
SPAST-201ENST00000315285 ACOT13Q9NPJ3 140 aa13.08□□□□□ -0.32
SPAST-201ENST00000315285 BTAF1O14981 1849 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 HCKP08631 526 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 MAGEA12P43365 314 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 CEBPGP53567 150 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 WNT4P56705 351 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 E2F1Q01094 437 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 C1orf61Q13536 156 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 PDZD3Q86UT5 571 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 OR6N1Q8NGY5 312 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 ZFP90Q8TF47 636 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 OR51E2Q9H255 320 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 ABI3Q9P2A4 366 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 CARD8Q9Y2G2 431 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 UBFD1O14562 309 aaKnown RBP13.07□□□□□ -0.32
SPAST-201ENST00000315285 KCNJ13O60928 360 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 RBBP9O75884 186 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 CDKN2CP42773 168 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 ARRB1P49407 418 aaPredicted RBP13.07□□□□□ -0.32
SPAST-201ENST00000315285 SNTB2Q13425 540 aaKnown RBP13.07□□□□□ -0.32
SPAST-201ENST00000315285 FOXJ1Q92949 421 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 TSACCQ96A04 125 aaPredicted RBP13.07□□□□□ -0.32
SPAST-201ENST00000315285 CNN2Q99439 309 aaKnown RBP13.07□□□□□ -0.32
SPAST-201ENST00000315285 SRA1Q9HD15 236 aaKnown RBP13.07□□□□□ -0.32
SPAST-201ENST00000315285 ANKMY1Q9P2S6 941 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 UPK1BO75841 260 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 ITGA5P08648 1049 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 ZNF26P17031 533 aaPredicted RBP13.07□□□□□ -0.32
SPAST-201ENST00000315285 ADH7P40394 386 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 OC90Q02509 493 aaPredicted RBP13.07□□□□□ -0.32
SPAST-201ENST00000315285 ELOCQ15369 112 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 SPRED1Q7Z699 444 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 RASGRP3Q8IV61 690 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 RNF175Q8N4F7 328 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 DEFB119Q8N690 84 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 LINC01465Q8N7H1 131 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 OR2T11Q8NH01 316 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 OR8S1Q8NH09 359 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 NXPE2Q96DL1 559 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 MAELQ96JY0 434 aaKnown RBP13.07□□□□□ -0.32
SPAST-201ENST00000315285 MROQ9BYG7 248 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms