RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 CD70P32970 193 aa13.87□□□□□ -0.19
COL6A2-202ENST00000310645 SMSP52788 366 aa13.87□□□□□ -0.19
COL6A2-202ENST00000310645 CTSCP53634 463 aa13.87□□□□□ -0.19
COL6A2-202ENST00000310645 SNTA1Q13424 505 aa13.87□□□□□ -0.19
COL6A2-202ENST00000310645 EXOSC2Q13868 293 aaKnown RBP13.87□□□□□ -0.19
COL6A2-202ENST00000310645 SUZ12Q15022 739 aaKnown RBP13.87□□□□□ -0.19
COL6A2-202ENST00000310645 KCNA10Q16322 511 aa13.87□□□□□ -0.19
COL6A2-202ENST00000310645 ZNF782Q6ZMW2 699 aaPredicted RBP13.87□□□□□ -0.19
COL6A2-202ENST00000310645 KLBQ86Z14 1044 aa13.87□□□□□ -0.19
COL6A2-202ENST00000310645 OR5D16Q8NGK9 328 aa13.87□□□□□ -0.19
COL6A2-202ENST00000310645 MYLIPQ8WY64 445 aa13.87□□□□□ -0.19
COL6A2-202ENST00000310645 RFT1Q96AA3 541 aa13.87□□□□□ -0.19
COL6A2-202ENST00000310645 SYT17Q9BSW7 474 aa13.87□□□□□ -0.19
COL6A2-202ENST00000310645 NDOR1Q9UHB4 597 aa13.87□□□□□ -0.19
COL6A2-202ENST00000310645 PRR23AA6NEV1 266 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 EOMESO95936 686 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 HRGP04196 525 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 HLA-DPB1P04440 258 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 ANXA3P12429 323 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 UQCRC2P22695 453 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 SLC6A11P48066 632 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 VSX2P58304 361 aaPredicted RBP13.86□□□□□ -0.19
COL6A2-202ENST00000310645 FAM71E1Q6IPT2 247 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 COMTD1Q86VU5 262 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 KIF18BQ86Y91 864 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 SMG7Q92540 1137 aaKnown RBP13.86□□□□□ -0.19
COL6A2-202ENST00000310645 EXOSC8Q96B26 276 aaKnown RBP13.86□□□□□ -0.19
COL6A2-202ENST00000310645 TBX5Q99593 518 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 DOCK6Q96HP0 2047 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 TRDV1A0A1B0GX56 115 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 SEPT4O43236 478 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 PRODHO43272 600 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 SLC6A1P30531 599 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 TBPL1P62380 186 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 LMAN2Q12907 356 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 BHLHB9Q6PI77 547 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 METAP1DQ6UB28 335 aaPredicted RBP13.86□□□□□ -0.19
COL6A2-202ENST00000310645 C6orf120Q7Z4R8 191 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 TEX47Q8TBZ9 253 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 APOBEC4Q8WW27 367 aaKnown RBP13.86□□□□□ -0.19
COL6A2-202ENST00000310645 NACC2Q96BF6 587 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 CXorf40BQ96DE9 158 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 ARHGAP9Q9BRR9 750 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 YIPF4Q9BSR8 244 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 RANBP3Q9H6Z4 567 aaPredicted RBP13.86□□□□□ -0.19
COL6A2-202ENST00000310645 SLAMF7Q9NQ25 335 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 MARCH5Q9NX47 278 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 CNIH4Q9P003 139 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 SRRDQ9UH36 339 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 TEX13CA0A0J9YWL9 993 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 SGK494L7N484 410 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 QSOX1O00391 747 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 ZNF821O75541 412 aaPredicted RBP13.86□□□□□ -0.19
COL6A2-202ENST00000310645 TFPIP10646 304 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 HMGA1P17096 107 aaKnown RBP13.86□□□□□ -0.19
COL6A2-202ENST00000310645 BUD31P41223 144 aaPredicted RBP13.86□□□□□ -0.19
COL6A2-202ENST00000310645 SLC1A3P43003 542 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 PRKAG1P54619 331 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 CDH11P55287 796 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 RAB14P61106 215 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 ZNF33BQ06732 778 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 RAB40BQ12829 278 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 GALEQ14376 348 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 AANATQ16613 207 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 TXNDC8Q6A555 127 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
COL6A2-202ENST00000310645 SPRYD4Q8WW59 207 aaPredicted RBP13.86□□□□□ -0.19
COL6A2-202ENST00000310645 RIT1Q92963 219 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 DMRT3Q9NQL9 472 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 ZC4H2Q9NQZ6 224 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 RDH8Q9NYR8 311 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 DYRK1BQ9Y463 629 aa13.86□□□□□ -0.19
COL6A2-202ENST00000310645 IGLV3-16A0A075B6K0 115 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 TMEM129A0AVI4 362 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 NR2F1P10589 423 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 FGF9P31371 208 aaPredicted RBP13.85□□□□□ -0.19
COL6A2-202ENST00000310645 ETV3P41162 512 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 ACLYP53396 1101 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 SLC36A4Q6YBV0 504 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 TMEM91Q6ZNR0 172 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 TRILQ7L0X0 811 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 GPR135Q8IZ08 494 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 ZNF354BQ96LW1 612 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 C12orf66Q96MD2 445 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 SECISBP2Q96T21 854 aaKnown RBP13.85□□□□□ -0.19
COL6A2-202ENST00000310645 OR51J1Q9H342 316 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 SCML1Q9UN30 329 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 PPIEQ9UNP9 301 aaKnown RBP13.85□□□□□ -0.19
COL6A2-202ENST00000310645 OR5K3A6NET4 321 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 ATP6V1G2-DDX39BF2Z307 99 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 CFDP00746 253 aaPredicted RBP13.85□□□□□ -0.19
COL6A2-202ENST00000310645 EPHA5P54756 1037 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 CRYZQ08257 329 aaKnown RBP13.85□□□□□ -0.19
COL6A2-202ENST00000310645 CNTN1Q12860 1018 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 KCNC3Q14003 757 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 MBTPS1Q14703 1052 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 FAM27D1Q5T7N8 215 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 ZNF783Q6ZMS7 281 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 ZNF480Q8WV37 535 aa13.85□□□□□ -0.19
COL6A2-202ENST00000310645 METTL2AQ96IZ6 378 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms