RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 CLCA2Q9UQC9 943 aa17.07■□□□□ 0.32
SPSB4-201ENST00000310546 CSNK1G3Q9Y6M4 447 aa17.07■□□□□ 0.32
SPSB4-201ENST00000310546 GNG14A0A1W2PPG7 69 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 PRPH2P23942 346 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 ITGB8P26012 769 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 FGF9P31371 208 aaPredicted RBP17.06■□□□□ 0.32
SPSB4-201ENST00000310546 KIAA1024LP59773 190 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 BOP1Q14137 746 aaKnown RBP17.06■□□□□ 0.32
SPSB4-201ENST00000310546 ZNF169Q14929 603 aaPredicted RBP17.06■□□□□ 0.32
SPSB4-201ENST00000310546 ATP13A5Q4VNC0 1218 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 C12orf73Q69YU5 71 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 RNF32Q9H0A6 362 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 CCSER2Q9H7U1 834 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 IL17CQ9P0M4 197 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 SCP2D1Q9UJQ7 156 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 A0A1B0GVI7 797 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 KRBOX1C9JBD0 128 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 DVL2O14641 736 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 HRO43593 1189 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 PRMT3O60678 531 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 APOC3P02656 99 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 ANXA4P09525 319 aaPredicted RBP17.06■□□□□ 0.32
SPSB4-201ENST00000310546 GPR85P60893 370 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 DUSP4Q13115 394 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 OPCMLQ14982 345 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 NHLRC3Q5JS37 347 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 C10orf120Q5SQS8 335 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 GPRC6AQ5T6X5 926 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 RETSATQ6NUM9 610 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 ATRAIDQ6UW56 229 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 OR4K3Q96R72 315 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 NKIRAS2Q9NYR9 191 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 OR6C2Q9NZP2 312 aa17.06■□□□□ 0.32
SPSB4-201ENST00000310546 SPTBN5Q9NRC6 3674 aaKnown RBP17.06■□□□□ 0.32
SPSB4-201ENST00000310546 MEIKINA0A087WXM9 373 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 MGAT4DA6NG13 374 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 SYN3O14994 580 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 HOXB3P14651 431 aaPredicted RBP17.05■□□□□ 0.32
SPSB4-201ENST00000310546 POU3F2P20265 443 aaPredicted RBP17.05■□□□□ 0.32
SPSB4-201ENST00000310546 DCST1Q5T197 706 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 C3P1Q6ZMU1 363 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 MOSPD2Q8NHP6 518 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 C11orf24Q96F05 449 aaPredicted RBP17.05■□□□□ 0.32
SPSB4-201ENST00000310546 DDOQ99489 341 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 CACNG6Q9BXT2 260 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 ZNF282Q9UDV7 671 aaPredicted RBP17.05■□□□□ 0.32
SPSB4-201ENST00000310546 TESQ9UGI8 421 aaKnown RBP17.05■□□□□ 0.32
SPSB4-201ENST00000310546 FBXL2Q9UKC9 423 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 GPR52Q9Y2T5 361 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 PRELID3BQ9Y3B1 194 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 GABRPO00591 440 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 SLC19A2O60779 497 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 EOMESO95936 686 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 DRD5P21918 477 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 AHCYP23526 432 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 SELENOPP49908 381 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 DSC1Q08554 894 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 RNLSQ5VYX0 342 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 CERS6Q6ZMG9 384 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 GPR135Q8IZ08 494 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 SAMD12Q8N8I0 201 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 PAWRQ96IZ0 340 aaKnown RBP17.05■□□□□ 0.32
SPSB4-201ENST00000310546 ZNF582Q96NG8 517 aaPredicted RBP17.05■□□□□ 0.32
SPSB4-201ENST00000310546 C12orf57Q99622 126 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 ZNF436Q9C0F3 470 aaPredicted RBP17.05■□□□□ 0.32
SPSB4-201ENST00000310546 MARCH2Q9P0N8 246 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 GLS2Q9UI32 602 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 BTNL2Q9UIR0 455 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 CLEC4AQ9UMR7 237 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 ASB4Q9Y574 426 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 AP1M2Q9Y6Q5 423 aa17.05■□□□□ 0.32
SPSB4-201ENST00000310546 DRGXA6NNA5 263 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 H7C0S8 307 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 SH3BP5O60239 455 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 PTP4A3O75365 173 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 B3GALNT1O75752 331 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 OR12D1P0DN82 309 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 ELOAQ14241 798 aaKnown RBP17.04■□□□□ 0.32
SPSB4-201ENST00000310546 PUM1Q14671 1186 aaKnown RBP eCLIP17.04■□□□□ 0.32
SPSB4-201ENST00000310546 GRIN2CQ14957 1233 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 OCLNQ16625 522 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 ADNP2Q6IQ32 1131 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 ALKAL2Q6UX46 152 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 LINGO4Q6UY18 593 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 UBE2R2Q712K3 238 aaPredicted RBP17.04■□□□□ 0.32
SPSB4-201ENST00000310546 RASGRP3Q8IV61 690 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 ZNF687Q8N1G0 1237 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 CASD1Q96PB1 797 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 H2AFJQ9BTM1 129 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 NLGN3Q9NZ94 848 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 FAM8A1Q9UBU6 413 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 TMEM5Q9Y2B1 443 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 TRDV1A0A1B0GX56 115 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 SIGLEC5O15389 551 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 C6orf47O95873 294 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 IFNA14P01570 189 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 GBAP04062 536 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 LPLP06858 475 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 PSMA3P25788 255 aa17.04■□□□□ 0.32
SPSB4-201ENST00000310546 SLC6A4P31645 630 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms