RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ESPNB1AK53 854 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 H3BQF6 201 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 TO15178 435 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 HCN1O60741 890 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 PPM1BO75688 479 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 ANXA4P09525 319 aaPredicted RBP18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 NAGAP17050 411 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 PRPH2P23942 346 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 BTKQ06187 659 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 HLA-DQA1Q5Y7H0 255 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 CLEC6AQ6EIG7 209 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 OR5M9Q8NGP3 310 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 DIO2Q92813 273 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 EXOSC8Q96B26 276 aaKnown RBP18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 SDCCAG3Q96C92 435 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 LCORQ96JN0 433 aaPredicted RBP18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 FCRL1Q96LA6 429 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 VSTM2LQ96N03 204 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 RILPQ96NA2 401 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 DOHHQ9BU89 302 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 SHCBP1LQ9BZQ2 653 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 SLC6A15Q9H2J7 730 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 TUBB1Q9H4B7 451 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 CHST11Q9NPF2 352 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 SLC35C2Q9NQQ7 365 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 BOKQ9UMX3 212 aaPredicted RBP18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 RNF6Q9Y252 685 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 GPR55Q9Y2T6 319 aaPredicted RBP18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 ZNF780BQ9Y6R6 833 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 KIAA1549Q9HCM3 1950 aa18.16■□□□□ 0.5
PDZRN3-202ENST00000308537 MYO1GB0I1T2 1018 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 BCKDKO14874 412 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 RSL1D1O76021 490 aaKnown RBP18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 CT45A8P0DMV1 189 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 CT45A9P0DMV2 189 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 DDCP20711 480 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 ARRB2P32121 409 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 PPICP45877 212 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 NUP107P57740 925 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 TFF3Q07654 80 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 ZNF763Q0D2J5 394 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 CT45A2Q5DJT8 189 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 TBCELQ5QJ74 424 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 WDR93Q6P2C0 686 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 NPSR1Q6W5P4 371 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 RNF165Q6ZSG1 346 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 Q6ZSR9 355 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 ZNF295-AS1Q8N0V1 137 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 EID3Q8N140 333 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 RIBC1Q8N443 379 aaPredicted RBP18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 OR2T11Q8NH01 316 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 RNF138Q8WVD3 245 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 KAT2AQ92830 837 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 HSPBAP1Q96EW2 488 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 APOPT1Q96IL0 206 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 BTBD9Q96Q07 612 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 NODALQ96S42 347 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 TRIM8Q9BZR9 551 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 ENKD1Q9H0I2 346 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 MYNNQ9NPC7 610 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 TAS2R7Q9NYW3 318 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 BCAP29Q9UHQ4 241 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 CFL2Q9Y281 166 aa18.15■□□□□ 0.5
PDZRN3-202ENST00000308537 TRGV5A0A0B4J1U4 118 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 CCDC151A5D8V7 595 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 TP53I11O14683 189 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 ACOX3O15254 700 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 UGT2B11O75310 529 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 UROSP10746 265 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 CREB1P16220 341 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 IGFBP2P18065 325 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 DRD5P21918 477 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 TACR1P25103 407 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 ACVR2AP27037 513 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 GSTM5P46439 218 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 MAN2A2P49641 1150 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 TMED10P49755 219 aaKnown RBP18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 HEPACAMQ14CZ8 416 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 C6orf163Q5TEZ5 329 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 MCEMP1Q8IX19 187 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 OR7G2Q8NG99 324 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 NEIL3Q8TAT5 605 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 FAM76AQ8TAV0 307 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 ERP27Q96DN0 273 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 OMA1Q96E52 524 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 TMEM41AQ96HV5 264 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 EGLN2Q96KS0 407 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 ZNF597Q96LX8 424 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 SLC17A7Q9P2U7 560 aa18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 POLR3HQ9Y535 204 aaPredicted RBP18.14■□□□□ 0.49
PDZRN3-202ENST00000308537 TLDC2A0PJX2 215 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 FRG2CA6NGY1 282 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 CAPN14A8MX76 684 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 B4DXG7 233 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 PLOD3O60568 738 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 SLU7O95391 586 aaKnown RBP18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 PSMG1O95456 288 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 HPNP05981 417 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 CHRNGP07510 517 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 GLI4P10075 376 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms