RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ZNF639Q9UID6 485 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 BAG5Q9UL15 447 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 FAM149AA5PLN7 773 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 SYNDIG1LA6NDD5 238 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 TMX2-CTNND1H3BSU7 103 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 DYRK3O43781 588 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 CST1P01037 141 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 TNNI3P19429 210 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 PDX1P52945 283 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 DCDP81605 110 aaKnown RBP16.37■□□□□ 0.21
KRT28-201ENST00000306658 MC2RQ01718 297 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 OCA2Q04671 838 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 EXOSC7Q15024 291 aaKnown RBP16.37■□□□□ 0.21
KRT28-201ENST00000306658 MAPK11Q15759 364 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 NKAIN1Q4KMZ8 207 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 GPAT3Q53EU6 434 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 VWA2Q5GFL6 755 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 DGAT2L6Q6ZPD8 337 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 C16orf62Q7Z3J2 963 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 VTCN1Q7Z7D3 282 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 ZDHHC21Q8IVQ6 265 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 BMPERQ8N8U9 685 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 SLC38A9Q8NBW4 561 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 SLC16A11Q8NCK7 471 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 ICA1LQ8NDH6 482 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 SIMC1Q8NDZ2 872 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 BBS10Q8TAM1 723 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 DOK4Q8TEW6 326 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 SLC35A4Q96G79 324 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 TRNT1Q96Q11 434 aaKnown RBP16.37■□□□□ 0.21
KRT28-201ENST00000306658 CMKLR1Q99788 373 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 SPATA5L1Q9BVQ7 753 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 TGIF2Q9GZN2 237 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 PIGUQ9H490 435 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 BCL2L10Q9HD36 194 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 APMAPQ9HDC9 416 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 GIN1Q9NXP7 522 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 DNAJB9Q9UBS3 223 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 DTNAQ9Y4J8 743 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 OTOGLQ3ZCN5 2332 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 IGKV3D-11A0A0A0MRZ8 115 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 A0A0G2JPF8 293 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 PRAMEF27A3QJZ7 478 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 HNRNPCL2B2RXH8 293 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 HNRNPCL3B7ZW38 293 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 FOXD2O60548 495 aaPredicted RBP16.36■□□□□ 0.21
KRT28-201ENST00000306658 RFPL3O75679 317 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 OPN1SWP03999 348 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 FABP3P05413 133 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 ALOX5P09917 674 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 HNRNPCL4P0DMR1 293 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 S1PR1P21453 382 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 MAGEA2P43356 314 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 ZNF267Q14586 743 aaPredicted RBP16.36■□□□□ 0.21
KRT28-201ENST00000306658 CCDC157Q569K6 752 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 RPS26P11Q5JNZ5 115 aaPredicted RBP16.36■□□□□ 0.21
KRT28-201ENST00000306658 IZUMO2Q6UXV1 221 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 ARMC8Q8IUR7 673 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 OR52R1Q8NGF1 315 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 DNAJC9Q8WXX5 260 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 STACQ99469 402 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 ZNF184Q99676 751 aaPredicted RBP16.36■□□□□ 0.21
KRT28-201ENST00000306658 BTBD2Q9BX70 525 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 STRADBQ9C0K7 418 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 CNOT11Q9UKZ1 510 aaKnown RBP16.36■□□□□ 0.21
KRT28-201ENST00000306658 LRRC42Q9Y546 428 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 KCNE3Q9Y6H6 103 aa16.36■□□□□ 0.21
KRT28-201ENST00000306658 FER1L5A0AVI2 2057 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 IGLV3-12A0A075B6K2 115 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 GNGT2O14610 69 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 CPNE3O75131 537 aaKnown RBP16.35■□□□□ 0.21
KRT28-201ENST00000306658 CBX7O95931 251 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 ONECUT2O95948 504 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 SEMG1P04279 462 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 ETS2P15036 469 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 RORAP35398 523 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 KCNJ10P78508 379 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 RHAGQ02094 409 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 IFI44LQ53G44 452 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 HEPHL1Q6MZM0 1159 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 COX15Q7KZN9 410 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 VPS50Q96JG6 964 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 CTRCQ99895 268 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 DUSP22Q9NRW4 184 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 SLC22A11Q9NSA0 550 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 C14orf105Q9NVL8 296 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 MKL2Q9ULH7 1088 aa16.35■□□□□ 0.21
KRT28-201ENST00000306658 B4E171 279 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 PRAMEF2O60811 474 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 NME6O75414 186 aaPredicted RBP16.34■□□□□ 0.21
KRT28-201ENST00000306658 MFN2O95140 757 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 CCL4P13236 92 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 AGXTP21549 392 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 TSPAN7P41732 249 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 PGDP52209 483 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 HPCAP84074 193 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 FUT7Q11130 342 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 ZNHIT3Q15649 155 aaPredicted RBP16.34■□□□□ 0.21
KRT28-201ENST00000306658 NSDHLQ15738 373 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 DUSP5Q16690 384 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms