RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 FOLH1BQ9HBA9 442 aa10.17□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 TCF7L2Q9NQB0 619 aa10.17□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 PCDHGB4Q9UN71 923 aa10.17□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 COPG1Q9Y678 874 aaKnown RBP10.17□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 PIEZO2Q9H5I5 2752 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 NINQ8N4C6 2090 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 IGSF10Q6WRI0 2623 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 FRG2CA6NGY1 282 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 TP53I11O14683 189 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 ACOX3O15254 700 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 EMC8O43402 210 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 NME2P1O60361 137 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 ERN1O75460 977 aaKnown RBP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 NADKO95544 446 aaPredicted RBP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 CRYABP02511 175 aaKnown RBP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 P04436 131 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 ABCB1P08183 1280 aaPredicted RBP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 VIMP08670 466 aaKnown RBP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 TROVE2P10155 538 aaKnown RBP eCLIP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 LAMP1P11279 417 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 EFNA1P20827 205 aaPredicted RBP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 NME2P22392 152 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 KIR3DL1P43629 444 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 CDK9P50750 372 aaKnown RBP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 PRKAG1P54619 331 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 AQP5P55064 265 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 PSPHP78330 225 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 INPP5JQ15735 1006 aaPredicted RBP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 ANXA8L1Q5VT79 327 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 EPGNQ6UW88 154 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 GALNTL5Q7Z4T8 443 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 CAMKMTQ7Z624 323 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 RIMKLAQ8IXN7 391 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 OR2L13Q8N349 312 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 CISD2Q8N5K1 135 aaKnown RBP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 BCORP1Q8N888 145 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 ZNF441Q8N8Z8 693 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 GOLM1Q8NBJ4 401 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 GLB1L3Q8NCI6 653 aaPredicted RBP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 PSD4Q8NDX1 1056 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 FAM13CQ8NE31 585 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 NUP43Q8NFH3 380 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 OR5P2Q8WZ92 322 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 ADIPOR1Q96A54 375 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 TESCQ96BS2 214 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 COQ8BQ96D53 544 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 SCMH1Q96GD3 660 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 MARK4Q96L34 752 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 SGCZQ96LD1 299 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 MS4A4EQ96PG1 132 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 OR52B2Q96RD2 323 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 HES7Q9BYE0 225 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 TRIM4Q9C037 500 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 NXF5Q9H1B4 397 aaKnown RBP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 NPHS2Q9NP85 383 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 EQTNQ9NQ60 294 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 SACM1LQ9NTJ5 587 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 ZCCHC3Q9NUD5 404 aaKnown RBP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 C19orf53Q9UNZ5 99 aaPredicted RBP10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 DTX4Q9Y2E6 619 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 OR10H1Q9Y4A9 318 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 SNX8Q9Y5X2 465 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 NPFFR2Q9Y5X5 522 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 ZFYVE26Q68DK2 2539 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 SHANK1Q9Y566 2161 aa10.16□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 NBEAQ8NFP9 2946 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 TTC36A6NLP5 189 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 KLRC4-KLRK1H3BQV0 150 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 UPK1AO00322 258 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 RNASET2O00584 256 aaKnown RBP10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 ZNF195O14628 629 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 C6orf47O95873 294 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 FBXO45P0C2W1 286 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 ABCD3P28288 659 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 IL12BP29460 328 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 S100A3P33764 101 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 PPICP45877 212 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 PRIM2P49643 509 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 EMDP50402 254 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 UFM1P61960 85 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 GUCY1A3Q02108 690 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 DUSP8Q13202 625 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 NTRK2Q16620 822 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 FAM174BQ3ZCQ3 159 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 VPS26BQ4G0F5 336 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 PDCD4Q53EL6 469 aaKnown RBP10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 PRR30Q53SZ7 412 aaPredicted RBP10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 FHL5Q5TD97 284 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 TMEM198Q66K66 360 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 OR4F3Q6IEY1 312 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 BHLHB9Q6PI77 547 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 GK5Q6ZS86 529 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 ATCAYQ86WG3 371 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 PRR22Q8IZ63 422 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 MIER2Q8N344 545 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 SIMC1Q8NDZ2 872 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 OR8J2Q8NGG1 315 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 OR56A1Q8NGH5 318 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 OR4A15Q8NGL6 344 aa10.15□□□□□ -0.78
CSPG4P1Y-201ENST00000306641 JADE3Q92613 823 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms