RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 ACSM5Q6NUN0 579 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 FAM111BQ6SJ93 734 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 PAQR7Q86WK9 346 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 OR8D4Q8NGM9 314 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 OR9A2Q8NGT5 310 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 GNPDA2Q8TDQ7 276 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 SMIM10Q96HG1 83 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 WDFY2Q96P53 400 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 KXD1Q9BQD3 176 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 SLC6A17Q9H1V8 727 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 C6orf106Q9H6K1 298 aaPredicted RBP6.78□□□□□ -1.32
RGPD3-201ENST00000304514 EGLN3Q9H6Z9 239 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 TMEM74BQ9NUR3 256 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 KCNK6Q9Y257 313 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 EXOGQ9Y2C4 368 aaKnown RBP6.78□□□□□ -1.32
RGPD3-201ENST00000304514 SF3B6Q9Y3B4 125 aaKnown RBP6.78□□□□□ -1.32
RGPD3-201ENST00000304514 PCDHGB6Q9Y5F9 930 aa6.78□□□□□ -1.32
RGPD3-201ENST00000304514 LOC100506127A0A0U1RQW1 187 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 GLOD5A6NK44 160 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 OR52A4PA6NMU1 304 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 ISM1B1AKI9 464 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 ZNF670-ZNF695F2Z2N8 137 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 PCDH8O95206 1070 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 LYPD3O95274 346 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 CKMT1AP12532 417 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 ADPRHP54922 357 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 PSPHP78330 225 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 FCRL6Q6DN72 434 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 HMGN2P46Q86SG4 172 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 TAGAPQ8N103 731 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 RAB42Q8N4Z0 105 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 ZNF513Q8N8E2 541 aaPredicted RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 OR8J1Q8NGP2 316 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 NR4A3Q92570 626 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 DIO2Q92813 273 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 OTUB1Q96FW1 271 aaPredicted RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 IL4I1Q96RQ9 567 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 KCNS3Q9BQ31 491 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 APOOQ9BUR5 198 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 FAIM2Q9BWQ8 316 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 SLC38A1Q9H2H9 487 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 LYARQ9NX58 379 aaKnown RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 TMCC3Q9ULS5 477 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 ADAMTS20P59510 1910 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 PRSS38A1L453 326 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 RNGTTO60942 597 aaKnown RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 CNOT3O75175 753 aaKnown RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 CA3P07451 260 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 FHP07954 510 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 COL9A1P20849 921 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 GTF2E2P29084 291 aaKnown RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 PCYT1AP49585 367 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 KIAA1024LP59773 190 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 C3orf38Q5JPI3 329 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 VRK2Q86Y07 508 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 CNPPD1Q9BV87 410 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 QRSL1Q9H0R6 528 aaKnown RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 ANKRD19PQ9H560 264 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 SNRNP200O75643 2136 aaKnown RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 SYT5O00445 386 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 LINC01565O15544 149 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 EMC8O43402 210 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 SSX4O60224 188 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 NME6O75414 186 aaPredicted RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 APODP05090 189 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 HMGN2P05204 90 aaKnown RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 HSMCR30P0CW71 290 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 ACP2P11117 423 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 SSR2P43308 183 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 SEC13P55735 322 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 COX10Q12887 443 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 FZD5Q13467 585 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 ZNF79Q15937 498 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 NDUFA9Q16795 377 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 ZNF836Q6ZNA1 936 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 JPH3Q8WXH2 748 aaPredicted RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 SLC25A46Q96AG3 418 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 MED18Q9BUE0 208 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 POLR2J3Q9H1A7 115 aaKnown RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 SIAEQ9HAT2 523 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 FBXL12Q9NXK8 326 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 NPAP1Q9NZP6 1156 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 MDC1Q14676 2089 aaKnown RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 SURF4O15260 269 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 SOX6P35712 828 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 PDX1P52945 283 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 DECR1Q16698 335 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 CASP12Q6UXS9 341 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 QSOX2Q6ZRP7 698 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 VN1R4Q7Z5H5 301 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 AMER2Q8N7J2 671 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 ELP4Q96EB1 424 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 RNFT2Q96EX2 444 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 MYADMQ96S97 322 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 FNDC11Q9BVV2 318 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 ISYNA1Q9NPH2 558 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 IMP3Q9NV31 184 aaKnown RBP6.77□□□□□ -1.33
RGPD3-201ENST00000304514 KCMF1Q9P0J7 381 aa6.77□□□□□ -1.33
RGPD3-201ENST00000304514 PLEKHB1Q9UF11 243 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms