RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ZNF91Q05481 1191 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 RBBP4Q09028 425 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 DHCR24Q15392 516 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 LRIT3Q3SXY7 679 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 ZMAT1Q5H9K5 638 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 PRAMEF9Q5VWM5 478 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 SLC27A4Q6P1M0 643 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 SPNS1Q9H2V7 528 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 RETREG1Q9H6L5 497 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 SYNDIG1Q9H7V2 258 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 TEX10Q9NXF1 929 aaPredicted RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 MRPL15Q9P015 296 aaKnown RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 NPIPA5A0A0B4J1W7 369 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 A0A1W2PP55 124 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 NPIPA7E9PJI5 369 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 SSX4O60224 188 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 WISP3O95389 354 aaPredicted RBP13.3□□□□□ -0.28
SDC2-201ENST00000302190 NPIPA8P0DM63 369 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 SPNP16150 400 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 ZFP36L2P47974 494 aaKnown RBP13.3□□□□□ -0.28
SDC2-201ENST00000302190 KCNJ10P78508 379 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 IFITM3Q01628 133 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 TBCEQ15813 527 aaPredicted RBP13.3□□□□□ -0.28
SDC2-201ENST00000302190 KLHL22Q53GT1 634 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 TOR1AIP1Q5JTV8 583 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 PNCKQ6P2M8 343 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 SLCO4C1Q6ZQN7 724 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 FAM92BQ6ZTR7 304 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 ADGRD2Q7Z7M1 963 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 CRIPAKQ8N1N5 446 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 SLC39A11Q8N1S5 342 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 ISG20Q96AZ6 181 aaKnown RBP13.3□□□□□ -0.28
SDC2-201ENST00000302190 NEUROD4Q9HD90 331 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 MGAT4BQ9UQ53 548 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 SMAD9O15198 467 aaKnown RBP13.3□□□□□ -0.28
SDC2-201ENST00000302190 HLA-DQA2P01906 255 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 HMGN2P05204 90 aaKnown RBP13.3□□□□□ -0.28
SDC2-201ENST00000302190 OSMP13725 252 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 SDHBP21912 280 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 MPIP34949 423 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 DCDC1P59894 354 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 SIM1P81133 766 aaPredicted RBP13.3□□□□□ -0.28
SDC2-201ENST00000302190 ZC3H14Q6PJT7 736 aaKnown RBP13.3□□□□□ -0.28
SDC2-201ENST00000302190 IL20RBQ6UXL0 311 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 SLC46A3Q7Z3Q1 461 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 PRSS58Q8IYP2 241 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 SAMD12Q8N8I0 201 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 OR4F15Q8NGB8 312 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 PCNPQ8WW12 178 aaKnown RBP13.3□□□□□ -0.28
SDC2-201ENST00000302190 DOK1Q99704 481 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 MED28Q9H204 178 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 SLC52A3Q9NQ40 469 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 SLC16A5O15375 505 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 SOX30O94993 753 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 NPPBP16860 134 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 BMPR1AP36894 532 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 GNA13Q14344 377 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 LARS2Q15031 903 aaKnown RBP13.3□□□□□ -0.28
SDC2-201ENST00000302190 MLIPQ5VWP3 458 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 ESX1Q8N693 406 aa13.3□□□□□ -0.28
SDC2-201ENST00000302190 TREX2Q9BQ50 279 aaPredicted RBP13.3□□□□□ -0.28
SDC2-201ENST00000302190 ISPDA4D126 451 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 RFXAPO00287 272 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 RNASET2O00584 256 aaKnown RBP13.29□□□□□ -0.28
SDC2-201ENST00000302190 TGM1P22735 817 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 RPS19P39019 145 aaKnown RBP13.29□□□□□ -0.28
SDC2-201ENST00000302190 PBX2P40425 430 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 EIF2DP41214 584 aaKnown RBP13.29□□□□□ -0.28
SDC2-201ENST00000302190 SLC6A11P48066 632 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 KHKP50053 298 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 KCNC3Q14003 757 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 KHDRBS2Q5VWX1 349 aaKnown RBP13.29□□□□□ -0.28
SDC2-201ENST00000302190 PODNL1Q6PEZ8 512 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 COX18Q8N8Q8 333 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 PJA1Q8NG27 643 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 COQ8BQ96D53 544 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 C16orf58Q96GQ5 468 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 CLEC4MQ9H2X3 399 aaPredicted RBP13.29□□□□□ -0.28
SDC2-201ENST00000302190 EXTL2Q9UBQ6 330 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 LRRTM2O43300 516 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 ASGR2P07307 311 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 HSD3B1P14060 373 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 ATF4P18848 351 aaPredicted RBP13.29□□□□□ -0.28
SDC2-201ENST00000302190 HSD3B2P26439 372 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 CASP3P42574 277 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 CCNJQ5T5M9 372 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 FIGNL1Q6PIW4 674 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 NRMQ8IXM6 262 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 SLC37A3Q8NCC5 494 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 NLGN4YQ8NFZ3 816 aaPredicted RBP13.29□□□□□ -0.28
SDC2-201ENST00000302190 OR5P2Q8WZ92 322 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 PMEPA1Q969W9 287 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 ZNF514Q96K75 400 aaPredicted RBP13.29□□□□□ -0.28
SDC2-201ENST00000302190 RIPOR3Q96MK2 946 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 SH2B3Q9UQQ2 575 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 WDR45Q9Y484 360 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 FAM86C2PA6NEL3 165 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 METTL15A6NJ78 407 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 CDK2AP1O14519 115 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 GAPDHSO14556 408 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms