RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 SPATA5L1Q9BVQ7 753 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 YTHDF1Q9BYJ9 559 aaKnown RBP20.85■□□□□ 0.93
SMAD1-201ENST00000302085 RBCK1Q9BYM8 510 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 GRIP2Q9C0E4 1043 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 RLIMQ9NVW2 624 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 MAT2BQ9NZL9 334 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 KCND3Q9UK17 655 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 ARID1BQ8NFD5 2236 aaPredicted RBP20.85■□□□□ 0.93
SMAD1-201ENST00000302085 A0A087WV62 115 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 DUXAA6NLW8 204 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 PLOD3O60568 738 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 ZIC2O95409 532 aaPredicted RBP20.85■□□□□ 0.93
SMAD1-201ENST00000302085 CT62P0C5K7 136 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 ACP2P11117 423 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 CLK3P49761 638 aaKnown RBP20.85■□□□□ 0.93
SMAD1-201ENST00000302085 SEPHS1P49903 392 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 SYT16Q17RD7 645 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 ATAD3BQ5T9A4 648 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 DGAT2L6Q6ZPD8 337 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 SATL1Q86VE3 508 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 GATAD2AQ86YP4 633 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 OR10G2Q8NGC3 310 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 VANGL1Q8TAA9 524 aaPredicted RBP20.85■□□□□ 0.93
SMAD1-201ENST00000302085 ZNF675Q8TD23 568 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 SLC9A6Q92581 669 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 EDAQ92838 391 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 CDS1Q92903 461 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 QRSL1Q9H0R6 528 aaKnown RBP20.85■□□□□ 0.93
SMAD1-201ENST00000302085 EPB41L1Q9H4G0 881 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 FSCN3Q9NQT6 498 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 DUX1O43812 170 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 UGT2B11O75310 529 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 GADD45GO95257 159 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 SLC35E2P0CK97 266 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 CYP4B1P13584 511 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 CSF2RBP32927 897 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 EXOSC6Q5RKV6 272 aaKnown RBP20.84■□□□□ 0.93
SMAD1-201ENST00000302085 ZNF691Q5VV52 312 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 NIPAL1Q6NVV3 410 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 C16orf62Q7Z3J2 963 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 PLXDC1Q8IUK5 500 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 CTHRC1Q96CG8 243 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 FAM192AQ9GZU8 254 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 CACNA1EQ15878 2313 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 NINQ8N4C6 2090 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 TNRC6BQ9UPQ9 1833 aaKnown RBP20.84■□□□□ 0.93
SMAD1-201ENST00000302085 DSPPQ9NZW4 1301 aa20.84■□□□□ 0.93
SMAD1-201ENST00000302085 H3BMH7 237 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 TGFBR3LH3BV60 316 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 BCKDKO14874 412 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 FCMRO60667 390 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 EPHA8P29322 1005 aaPredicted RBP20.83■□□□□ 0.93
SMAD1-201ENST00000302085 PDX1P52945 283 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 ISL1P61371 349 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 SKP1P63208 163 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 HSD11B2P80365 405 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 ERV3-1Q14264 604 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 DUSP5Q16690 384 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 CARFQ8N187 725 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 OR6C4Q8NGE1 309 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 PIGKQ92643 395 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 ADAP2Q9NPF8 381 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 NLGN3Q9NZ94 848 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 CALML5Q9NZT1 146 aa20.83■□□□□ 0.93
SMAD1-201ENST00000302085 TMEM184BQ9Y519 407 aaPredicted RBP20.83■□□□□ 0.93
SMAD1-201ENST00000302085 ASXL3Q9C0F0 2248 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 A0A1B0GTQ1 180 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 A8MVJ9 347 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 M0R3H8 397 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 SLITRK5O94991 958 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 LGI1O95970 557 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 EPHA2P29317 976 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 CD47Q08722 323 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 IL18R1Q13478 541 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 EXOSC7Q15024 291 aaKnown RBP20.83■□□□□ 0.92
SMAD1-201ENST00000302085 CTU2Q2VPK5 515 aaKnown RBP20.83■□□□□ 0.92
SMAD1-201ENST00000302085 SNAP47Q5SQN1 464 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 DEF8Q6ZN54 512 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 C11orf74Q86VG3 221 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 C1orf210Q8IVY1 113 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 METTL27Q8N6F8 245 aaPredicted RBP20.83■□□□□ 0.92
SMAD1-201ENST00000302085 MMABQ96EY8 250 aaPredicted RBP20.83■□□□□ 0.92
SMAD1-201ENST00000302085 ING2Q9H160 280 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 NMNAT1Q9HAN9 279 aaPredicted RBP20.83■□□□□ 0.92
SMAD1-201ENST00000302085 SEMA5BQ9P283 1151 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 SUSD2Q9UGT4 822 aa20.83■□□□□ 0.92
SMAD1-201ENST00000302085 E9PQ18 207 aa20.82■□□□□ 0.92
SMAD1-201ENST00000302085 PCDHGA12O60330 932 aa20.82■□□□□ 0.92
SMAD1-201ENST00000302085 CTNSO60931 367 aa20.82■□□□□ 0.92
SMAD1-201ENST00000302085 AGR2O95994 175 aa20.82■□□□□ 0.92
SMAD1-201ENST00000302085 IFI6P09912 130 aa20.82■□□□□ 0.92
SMAD1-201ENST00000302085 PABPC4LP0CB38 370 aaKnown RBP20.82■□□□□ 0.92
SMAD1-201ENST00000302085 CDH2P19022 906 aaPredicted RBP20.82■□□□□ 0.92
SMAD1-201ENST00000302085 NR1H2P55055 460 aa20.82■□□□□ 0.92
SMAD1-201ENST00000302085 TPD52P55327 224 aaPredicted RBP20.82■□□□□ 0.92
SMAD1-201ENST00000302085 GPLD1P80108 840 aa20.82■□□□□ 0.92
SMAD1-201ENST00000302085 FOXD4Q12950 439 aaPredicted RBP20.82■□□□□ 0.92
SMAD1-201ENST00000302085 RAPSNQ13702 412 aa20.82■□□□□ 0.92
SMAD1-201ENST00000302085 GRM7Q14831 915 aa20.82■□□□□ 0.92
SMAD1-201ENST00000302085 MEP1AQ16819 746 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms