RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 BTN3A2P78410 334 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 CEACAM7Q14002 265 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 GRM7Q14831 915 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 C6orf10Q5SRN2 563 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 C1orf146Q5VVC0 180 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 FBXW10Q5XX13 1052 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 OR4F3Q6IEY1 312 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 XKRXQ6PP77 449 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 DLEU7Q6UYE1 221 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 COX15Q7KZN9 410 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 ZNF295-AS1Q8N0V1 137 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 TTC29Q8NA56 475 aaPredicted RBP19.61■□□□□ 0.73
SMCO4-201ENST00000298966 GFM2Q969S9 779 aaKnown RBP19.61■□□□□ 0.73
SMCO4-201ENST00000298966 CGREF1Q99674 301 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 ANKHQ9HCJ1 492 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 PSME2Q9UL46 239 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 EXO1Q9UQ84 846 aaKnown RBP19.61■□□□□ 0.73
SMCO4-201ENST00000298966 L3MBTL1Q9Y468 752 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 ASB4Q9Y574 426 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 PCDHA9Q9Y5H5 950 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 GMEB1Q9Y692 573 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 NAV3Q8IVL0 2385 aa19.61■□□□□ 0.73
SMCO4-201ENST00000298966 RFXANKO14593 260 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 SCN2BO60939 215 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 ATP6V1G2O95670 118 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 LAMP1P11279 417 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 PPIBP23284 216 aaKnown RBP19.6■□□□□ 0.73
SMCO4-201ENST00000298966 TLX1P31314 330 aaPredicted RBP19.6■□□□□ 0.73
SMCO4-201ENST00000298966 TNFSF10P50591 281 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 WNT3P56703 355 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 EEFSECP57772 596 aaKnown RBP19.6■□□□□ 0.73
SMCO4-201ENST00000298966 ACTR3P61158 418 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 RBPJQ06330 500 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 KPNB1Q14974 876 aaKnown RBP19.6■□□□□ 0.73
SMCO4-201ENST00000298966 TESK1Q15569 626 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 FAM214AQ32MH5 1076 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 SPNS3Q6ZMD2 512 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 KBTBD2Q8IY47 623 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 FAM47BQ8NA70 645 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 GOT1L1Q8NHS2 421 aaPredicted RBP19.6■□□□□ 0.73
SMCO4-201ENST00000298966 WDR60Q8WVS4 1066 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.6■□□□□ 0.73
SMCO4-201ENST00000298966 MVB12AQ96EY5 273 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 CRB3Q9BUF7 120 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 ZNF160Q9HCG1 818 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 SERHLQ9NQF3 203 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 CUTCQ9NTM9 273 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 ACSS1Q9NUB1 689 aaPredicted RBP19.6■□□□□ 0.73
SMCO4-201ENST00000298966 ADA2Q9NZK5 511 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 CTSFQ9UBX1 484 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 SEC14L3Q9UDX4 400 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 SH3BGRL2Q9UJC5 107 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 POMPQ9Y244 141 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 CACNA1CQ13936 2221 aa19.6■□□□□ 0.73
SMCO4-201ENST00000298966 GALR3O60755 368 aaPredicted RBP19.59■□□□□ 0.73
SMCO4-201ENST00000298966 ANP32DO95626 131 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 CRYABP02511 175 aaKnown RBP19.59■□□□□ 0.73
SMCO4-201ENST00000298966 SLC6A2P23975 617 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 CERS1P27544 350 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 SLC7A2P52569 658 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 CASP6P55212 293 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 PHC1P78364 1004 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 MLC1Q15049 377 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 MUM1Q2TAK8 710 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 NDUFAF5Q5TEU4 345 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 RIPOR1Q6ZS17 1223 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 TRIML2Q8N7C3 387 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 ZCCHC10Q8TBK6 192 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 JADE3Q92613 823 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 ANKRD27Q96NW4 1050 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 PANX1Q96RD7 426 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 MACROD1Q9BQ69 325 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 MUC13Q9H3R2 512 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 NEUROD4Q9HD90 331 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 GIMAP4Q9NUV9 329 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 PLA2G3Q9NZ20 509 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 ZNF282Q9UDV7 671 aaPredicted RBP19.59■□□□□ 0.73
SMCO4-201ENST00000298966 CD300AQ9UGN4 299 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 CORO2BQ9UQ03 480 aa19.59■□□□□ 0.73
SMCO4-201ENST00000298966 TRBV5-3A0A0A0MS03 114 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 C4orf51C9J302 202 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 PROM1O43490 865 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 NSA2O95478 260 aaKnown RBP19.58■□□□□ 0.72
SMCO4-201ENST00000298966 NR2F6P10588 404 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 HSD17B1P14061 328 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 FRKP42685 505 aaPredicted RBP19.58■□□□□ 0.72
SMCO4-201ENST00000298966 TNFRSF17Q02223 184 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 DEFB134Q4QY38 66 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 NANOGP8Q6NSW7 305 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 SLC15A3Q8IY34 581 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 ARHGEF39Q8N4T4 335 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 ZFP28Q8NHY6 868 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 TMEM125Q96AQ2 219 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 ZBED6CLQ96FA7 236 aaPredicted RBP19.58■□□□□ 0.72
SMCO4-201ENST00000298966 PAIP1Q9H074 479 aaKnown RBP19.58■□□□□ 0.72
SMCO4-201ENST00000298966 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.58■□□□□ 0.721e-6■■■■□ 20.7
SMCO4-201ENST00000298966 NANOGQ9H9S0 305 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 IL1RL2Q9HB29 575 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 ABI3Q9P2A4 366 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 PTGFRNQ9P2B2 879 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms