RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 FAM180AQ6UWF9 173 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 RNF111Q6ZNA4 994 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 Q6ZSR9 355 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 RP1L1Q8IWN7 2480 aaPredicted RBP11.21□□□□□ -0.61
HMGB2-201ENST00000296503 OR8K3Q8NH51 312 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 GRHL3Q8TE85 626 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 TWIST2Q8WVJ9 160 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 TMEM125Q96AQ2 219 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 FBXL20Q96IG2 436 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 MRPS26Q9BYN8 205 aaKnown RBP11.21□□□□□ -0.61
HMGB2-201ENST00000296503 RBM38Q9H0Z9 239 aaKnown RBP11.21□□□□□ -0.61
HMGB2-201ENST00000296503 ZNF696Q9H7X3 374 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 LRTM1Q9HBL6 345 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 C1orf109Q9NX04 203 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 MYOTQ9UBF9 498 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 ZDHHC2Q9UIJ5 367 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 ERVK-11Q9UQG0 969 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 NTNG1Q9Y2I2 539 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 RASAL1O95294 804 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 SERPINE1P05121 402 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 PRDX6P30041 224 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 HK2P52789 917 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 PDK3Q15120 406 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 UGT3A2Q3SY77 523 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 SLC29A4Q7RTT9 530 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 GALNT12Q8IXK2 581 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 ARMC10Q8N2F6 343 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 TMEM178AQ8NBL3 297 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 ASB15Q8WXK1 588 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 EXOSC8Q96B26 276 aaKnown RBP11.21□□□□□ -0.62
HMGB2-201ENST00000296503 C11orf24Q96F05 449 aaPredicted RBP11.21□□□□□ -0.62
HMGB2-201ENST00000296503 METTL2AQ96IZ6 378 aaKnown RBP11.21□□□□□ -0.62
HMGB2-201ENST00000296503 BRINP2Q9C0B6 783 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 TUBB1Q9H4B7 451 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 CXorf21Q9HAI6 301 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 GIMAP4Q9NUV9 329 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 C6orf203Q9P0P8 240 aaPredicted RBP11.21□□□□□ -0.62
HMGB2-201ENST00000296503 RAB26Q9ULW5 256 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 CCL27Q9Y4X3 112 aa11.21□□□□□ -0.62
HMGB2-201ENST00000296503 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.21□□□□□ -0.62
HMGB2-201ENST00000296503 PRRC2CQ9Y520 2896 aaKnown RBP11.21□□□□□ -0.62
HMGB2-201ENST00000296503 TMEM200CA6NKL6 621 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 PIP5K1BO14986 540 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 ITM2AO43736 263 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 SNNO75324 88 aaPredicted RBP11.2□□□□□ -0.62
HMGB2-201ENST00000296503 LYPLA1O75608 230 aaPredicted RBP11.2□□□□□ -0.62
HMGB2-201ENST00000296503 IGKV3-11P04433 115 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 SP1P08047 785 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 SMIM18P0DKX4 95 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 BGNP21810 368 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 ARRB2P32121 409 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 TRHRP34981 398 aaPredicted RBP11.2□□□□□ -0.62
HMGB2-201ENST00000296503 GSTM5P46439 218 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 ABCE1P61221 599 aaKnown RBP11.2□□□□□ -0.62
HMGB2-201ENST00000296503 ZNF763Q0D2J5 394 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 OGFRL1Q5TC84 451 aaPredicted RBP11.2□□□□□ -0.62
HMGB2-201ENST00000296503 IL20RBQ6UXL0 311 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 TREML1Q86YW5 311 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 CCDC116Q8IYX3 515 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 CYP4Z2PQ8N1L4 340 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 GALNT11Q8NCW6 608 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 MDS2Q8NDY4 140 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 OR2T11Q8NH01 316 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 ACTRT2Q8TDY3 377 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 FAR1Q8WVX9 515 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 HES7Q9BYE0 225 aa11.2□□□□□ -0.62
HMGB2-201ENST00000296503 ZNF395Q9H8N7 513 aaPredicted RBP11.2□□□□□ -0.62
HMGB2-201ENST00000296503 HELZ2Q9BYK8 2649 aaKnown RBP11.2□□□□□ -0.62
HMGB2-201ENST00000296503 A8MVJ9 347 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 TMEM114B3SHH9 223 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 PFDN1O60925 122 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 SLC25A12O75746 678 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 NEURL1O76050 574 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 CT62P0C5K7 136 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 PRPH2P23942 346 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 GRK2P25098 689 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 SSTR4P31391 388 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 SLC1A6P48664 564 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 STX3Q13277 289 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 TMED1Q13445 227 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 DCTN2Q13561 401 aaKnown RBP11.19□□□□□ -0.62
HMGB2-201ENST00000296503 KIAA0040Q15053 153 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 HLA-DQA1Q5Y7H0 255 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 FAM111BQ6SJ93 734 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 RNF165Q6ZSG1 346 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 GALNTL5Q7Z4T8 443 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 C9orf40Q8IXQ3 194 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 SAMD14Q8IZD0 417 aaPredicted RBP11.19□□□□□ -0.62
HMGB2-201ENST00000296503 LRRC25Q8N386 305 aaPredicted RBP11.19□□□□□ -0.62
HMGB2-201ENST00000296503 BCORP1Q8N888 145 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 ADCY4Q8NFM4 1077 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 CNRIP1Q96F85 164 aaPredicted RBP11.19□□□□□ -0.62
HMGB2-201ENST00000296503 MPP4Q96JB8 637 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 BBS4Q96RK4 519 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 GAL3ST4Q96RP7 486 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 RASL10BQ96S79 203 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 THTPAQ9BU02 230 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 TRIM45Q9H8W5 580 aaPredicted RBP11.19□□□□□ -0.62
HMGB2-201ENST00000296503 MIEF1Q9NQG6 463 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 SLC35C2Q9NQQ7 365 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms