RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 DCDC5Q6ZRR9 648 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 FNDC8Q8TC99 324 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 RELTQ969Z4 430 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 TSACCQ96A04 125 aaPredicted RBP12.15□□□□□ -0.46
PTCD1-201ENST00000292478 ATOH8Q96SQ7 321 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 NPLQ9BXD5 320 aaPredicted RBP12.15□□□□□ -0.46
PTCD1-201ENST00000292478 POTEKPQ9BYX7 375 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 LDAHQ9H6V9 325 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 PIGBOS1A0A0B4J2F0 54 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 TRBV2A0A0J9YWF9 115 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 TCRBV3S1A0A5B6 114 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 ADAMTS4O75173 837 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 HHEXQ03014 270 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 MRPL49Q13405 166 aaKnown RBP12.15□□□□□ -0.46
PTCD1-201ENST00000292478 TMEM69Q5SWH9 247 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 C22orf42Q6IC83 251 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 CGB2Q6NT52 195 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 PNCKQ6P2M8 343 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 SPATC1Q76KD6 591 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 TMED4Q7Z7H5 227 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 SFXN5Q8TD22 340 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 GATAD2BQ8WXI9 593 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 TANKQ92844 425 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 KCNK12Q9HB15 430 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 B4GALT7Q9UBV7 327 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 OR1A2Q9Y585 309 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 C11orf98E9PRG8 122 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 POLR1CO15160 346 aaPredicted RBP12.15□□□□□ -0.46
PTCD1-201ENST00000292478 UCHL1P09936 223 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 JMJD7P0C870 316 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 ADORA3P0DMS8 318 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 PYCR1P32322 319 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 MAGEA8P43361 318 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 NFATC3Q12968 1075 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 DEFB119Q8N690 84 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 OR6C4Q8NGE1 309 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 OR2L2Q8NH16 312 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 RPLP0P6Q8NHW5 317 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 ZDHHC1Q8WTX9 485 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 AGPAT4Q9NRZ5 378 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 PIAS3Q9Y6X2 628 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 DDX60Q8IY21 1712 aaKnown RBP12.15□□□□□ -0.46
PTCD1-201ENST00000292478 MAST2Q6P0Q8 1798 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 BLACEA4D250 179 aa12.15□□□□□ -0.47
PTCD1-201ENST00000292478 PPP5CP53041 499 aa12.15□□□□□ -0.47
PTCD1-201ENST00000292478 FOXA1P55317 472 aa12.15□□□□□ -0.47
PTCD1-201ENST00000292478 FAM26DQ5JW98 314 aa12.15□□□□□ -0.47
PTCD1-201ENST00000292478 ZNF551Q7Z340 670 aaPredicted RBP12.15□□□□□ -0.47
PTCD1-201ENST00000292478 DGLUCYQ7Z3D6 616 aa12.15□□□□□ -0.47
PTCD1-201ENST00000292478 KLBQ86Z14 1044 aa12.15□□□□□ -0.47
PTCD1-201ENST00000292478 ZNF584Q8IVC4 421 aa12.15□□□□□ -0.47
PTCD1-201ENST00000292478 PIANPQ8IYJ0 282 aa12.15□□□□□ -0.47
PTCD1-201ENST00000292478 METTL27Q8N6F8 245 aaPredicted RBP12.15□□□□□ -0.47
PTCD1-201ENST00000292478 GAL3ST3Q96A11 431 aa12.15□□□□□ -0.47
PTCD1-201ENST00000292478 ZNF300Q96RE9 604 aaPredicted RBP12.15□□□□□ -0.47
PTCD1-201ENST00000292478 COPZ2Q9P299 210 aa12.15□□□□□ -0.47
PTCD1-201ENST00000292478 PCDH17O14917 1159 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 SCO2O43819 266 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 CBLP22681 906 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 PRPS1P60891 318 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 ZNF852Q6ZMS4 543 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 ZNF765Q7L2R6 523 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 ADGRG5Q8IZF4 528 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 TOX2Q96NM4 488 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 APOOQ9BUR5 198 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 NMNAT1Q9HAN9 279 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-201ENST00000292478 SLC7A11Q9UPY5 501 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 MAB21L2Q9Y586 359 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 TRPM3Q9HCF6 1732 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-201ENST00000292478 C4AP0C0L4 1744 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 CDC40O60508 579 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTCD1-201ENST00000292478 ITGAMP11215 1152 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 CNR2P34972 360 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 SOX2P48431 317 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 GDI2P50395 445 aaKnown RBP12.14□□□□□ -0.47
PTCD1-201ENST00000292478 ODF4Q2M2E3 257 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 ALG10BQ5I7T1 473 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 ZNF597Q96LX8 424 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 VSTM2BA6NLU5 285 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 H3BUI4 141 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 EDIL3O43854 480 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 CDC123O75794 336 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-201ENST00000292478 GRIN2CQ14957 1233 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 SPIN3Q5JUX0 258 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 GATSQ8NAP1 163 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 SLC30A3Q99726 388 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 MEPEQ9NQ76 525 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-201ENST00000292478 TAS2R8Q9NYW2 309 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 RARRES3Q9UL19 164 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 ATXN1LP0C7T5 689 aaKnown RBP12.14□□□□□ -0.47
PTCD1-201ENST00000292478 SLC6A8P48029 635 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 SHC2P98077 582 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 CDK5R2Q13319 367 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 GGTA1PQ4G0N0 100 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 UGT2A3Q6UWM9 527 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 LIPIQ6XZB0 460 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 HSD11B1LQ7Z5J1 315 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 TMEM173Q86WV6 379 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-201ENST00000292478 ANKRD13BQ86YJ7 626 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 ZNF619Q8N2I2 560 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms