RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 GATA6Q92908 595 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 OR7D2Q96RA2 312 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 NDUFAF4Q9P032 175 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 PHF11Q9UIL8 331 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 WBP11Q9Y2W2 641 aaKnown RBP10.28□□□□□ -0.76
GGPS1-201ENST00000282841 CNOT1A5YKK6 2376 aaKnown RBP10.28□□□□□ -0.76
GGPS1-201ENST00000282841 LY6G6EA0A0G2JKS1 128 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 A0A1W2PQM1 296 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 TBX19O60806 448 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 H6PDO95479 791 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 RECKO95980 971 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 PORP16435 677 aaPredicted RBP10.28□□□□□ -0.76
GGPS1-201ENST00000282841 CDH12P55289 794 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 CCL7P80098 99 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 LSM11P83369 360 aaKnown RBP eCLIP10.28□□□□□ -0.76
GGPS1-201ENST00000282841 MYBPC1Q00872 1141 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 CHRNEQ04844 493 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 PRTGQ2VWP7 1150 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 ZC3H12BQ5HYM0 836 aaKnown RBP10.28□□□□□ -0.76
GGPS1-201ENST00000282841 FAM69BQ5VUD6 431 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 MLIPQ5VWP3 458 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 OR2T5Q6IEZ7 315 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 OR52E8Q6IFG1 317 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 UGT2A3Q6UWM9 527 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 GOLM1Q8NBJ4 401 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 OR2T29Q8NH02 315 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 ANKRD9Q96BM1 317 aaPredicted RBP10.28□□□□□ -0.76
GGPS1-201ENST00000282841 SLC35A4Q96G79 324 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 ADI1Q9BV57 179 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 AMBRA1Q9C0C7 1298 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 TMEM38AQ9H6F2 299 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 SEMA3GQ9NS98 782 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 GIN1Q9NXP7 522 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 PDP1Q9P0J1 537 aaPredicted RBP10.28□□□□□ -0.76
GGPS1-201ENST00000282841 U3KQA8 63 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 CFAP47Q6ZTR5 3102 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 FER1L5A0AVI2 2057 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 A0A1B0GTQ1 180 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 DUX1O43812 170 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 PCDHGA12O60330 932 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 SEMA7AO75326 666 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 ZIC2O95409 532 aaPredicted RBP10.28□□□□□ -0.76
GGPS1-201ENST00000282841 FHP07954 510 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 SSTR4P31391 388 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 XCR1P46094 333 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 CDH15P55291 814 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 CLDN6P56747 220 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 ZNF630Q2M218 657 aaPredicted RBP10.28□□□□□ -0.76
GGPS1-201ENST00000282841 MINDY4Q4G0A6 757 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 IQCCQ4KMZ1 466 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 DEF8Q6ZN54 512 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 Q6ZPB1 254 aaPredicted RBP10.28□□□□□ -0.76
GGPS1-201ENST00000282841 CYP4Z1Q86W10 505 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 ZFP28Q8NHY6 868 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 TOR3AQ9H497 397 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 PLCL2Q9UPR0 1127 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 ANGPT4Q9Y264 503 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 KLK4Q9Y5K2 254 aa10.28□□□□□ -0.76
GGPS1-201ENST00000282841 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 EMC8O43402 210 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 OR10H2O60403 315 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 ALPLP05186 524 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 RPLP0P05388 317 aaKnown RBP10.27□□□□□ -0.77
GGPS1-201ENST00000282841 ZNF10P21506 573 aaPredicted RBP10.27□□□□□ -0.77
GGPS1-201ENST00000282841 TSFMP43897 325 aaKnown RBP10.27□□□□□ -0.77
GGPS1-201ENST00000282841 PDX1P52945 283 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 PCBP3P57721 371 aaKnown RBP10.27□□□□□ -0.77
GGPS1-201ENST00000282841 MERTKQ12866 999 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 DUSP5Q16690 384 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 VWA2Q5GFL6 755 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 FAM209AQ5JX71 171 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 INTS11Q5TA45 600 aaKnown RBP10.27□□□□□ -0.77
GGPS1-201ENST00000282841 FIGNL1Q6PIW4 674 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 VRK2Q86Y07 508 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 TMEM126BQ8IUX1 230 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 THAP11Q96EK4 314 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 GIMAP5Q96F15 307 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 BTBD9Q96Q07 612 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 ARRDC1-AS1Q9H2J1 176 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 SMPD3Q9NY59 655 aaPredicted RBP10.27□□□□□ -0.77
GGPS1-201ENST00000282841 SEC14L3Q9UDX4 400 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 DTX4Q9Y2E6 619 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 NTNG1Q9Y2I2 539 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 LOC400499M0QZD8 3231 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 GPR75O95800 540 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 SEMG1P04279 462 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 PRR5P85299 388 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 SPIBQ01892 262 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 STX4Q12846 297 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 DAG1Q14118 895 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 TSPYL5Q86VY4 417 aaPredicted RBP10.27□□□□□ -0.77
GGPS1-201ENST00000282841 ARMC8Q8IUR7 673 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 EID3Q8N140 333 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 ESX1Q8N693 406 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 OR4N2Q8NGD1 307 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 OR51Q1Q8NH59 317 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 PSMA8Q8TAA3 256 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 TFAP2CQ92754 450 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 MUS81Q96NY9 551 aa10.27□□□□□ -0.77
GGPS1-201ENST00000282841 CTRCQ99895 268 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms