RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 DCST1Q5T197 706 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 FHL5Q5TD97 284 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 ZNF770Q6IQ21 691 aaPredicted RBP8.99□□□□□ -0.97
TRIM55-201ENST00000276573 HEPHL1Q6MZM0 1159 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 DEF8Q6ZN54 512 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 Q6ZPB1 254 aaPredicted RBP8.99□□□□□ -0.97
TRIM55-201ENST00000276573 AQP11Q8NBQ7 271 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 SLC16A11Q8NCK7 471 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 SIMC1Q8NDZ2 872 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 GTPBP3Q969Y2 492 aaKnown RBP8.99□□□□□ -0.97
TRIM55-201ENST00000276573 ZG16BQ96DA0 208 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 NODALQ96S42 347 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 SLC38A3Q99624 504 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 MAP3K3Q99759 626 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 SCN3BQ9NY72 215 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 A4GNTQ9UNA3 340 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 C19orf53Q9UNZ5 99 aaPredicted RBP8.99□□□□□ -0.97
TRIM55-201ENST00000276573 RNF6Q9Y252 685 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 SLC9A8Q9Y2E8 581 aa8.99□□□□□ -0.97
TRIM55-201ENST00000276573 A0A087WV62 115 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 M0R3H8 397 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 CASC3O15234 703 aaKnown RBP8.98□□□□□ -0.97
TRIM55-201ENST00000276573 CHST10O43529 356 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 PCDHGA12O60330 932 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 WBP4O75554 376 aaKnown RBP8.98□□□□□ -0.97
TRIM55-201ENST00000276573 SEC14L2O76054 403 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 OXSR1O95747 527 aaPredicted RBP8.98□□□□□ -0.97
TRIM55-201ENST00000276573 AGR2O95994 175 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 ATP1B1P05026 303 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 POU2F1P14859 743 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 BCKDHBP21953 392 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 ELAVL4P26378 380 aaKnown RBP8.98□□□□□ -0.97
TRIM55-201ENST00000276573 CAPZBP47756 277 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 CXCL12P48061 93 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 CSNK1EP49674 416 aaKnown RBP8.98□□□□□ -0.97
TRIM55-201ENST00000276573 RAB38P57729 211 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 CSNK2BP67870 215 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 SHC2P98077 582 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 TUBA3CQ13748 450 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 SEC23BQ15437 767 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 NPTX1Q15818 432 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 FAM214AQ32MH5 1076 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 ZNF628Q5EBL2 1059 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 ZNF311Q5JNZ3 666 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 C16orf62Q7Z3J2 963 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 WDR53Q7Z5U6 358 aaPredicted RBP8.98□□□□□ -0.97
TRIM55-201ENST00000276573 HMGN2P46Q86SG4 172 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 ENTHD1Q8IYW4 607 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 PARP8Q8N3A8 854 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 OR13F1Q8NGS4 319 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 OR9A4Q8NGU2 314 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 RHOXF1Q8NHV9 184 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 ZFAND2BQ8WV99 257 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 DNASE2BQ8WZ79 361 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 ANKRD9Q96BM1 317 aaPredicted RBP8.98□□□□□ -0.97
TRIM55-201ENST00000276573 TCTN2Q96GX1 697 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 MPP4Q96JB8 637 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 MS4A4EQ96PG1 132 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 FUZQ9BT04 418 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 ANKHQ9HCJ1 492 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 RASSF1Q9NS23 344 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 ERVK-18Q9QC07 812 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 MGAT4BQ9UQ53 548 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 PCDHGB1Q9Y5G3 927 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 SNX5Q9Y5X3 404 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 DSPPQ9NZW4 1301 aa8.98□□□□□ -0.97
TRIM55-201ENST00000276573 CCDC88CQ9P219 2028 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 K7ESF4 209 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 SYT5O00445 386 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 FAAHO00519 579 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 FCMRO60667 390 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 RDH16O75452 317 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 TRMUO75648 421 aaKnown RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 ALPPP05187 535 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 PCMT1P22061 227 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 DCKP27707 260 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 PCSK6P29122 969 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 RGS19P49795 217 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 SLC35A2P78381 396 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 ZP2Q05996 745 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 MGAT2Q10469 447 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 PIN1Q13526 163 aaPredicted RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 SMN1Q16637 294 aaKnown RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 DEFB133Q30KQ1 61 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 PROX2Q3B8N5 592 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 ARHGAP11BQ3KRB8 267 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 FGD3Q5JSP0 725 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 GPR107Q5VW38 600 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 GTF2IRD2BQ6EKJ0 949 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 KLHL17Q6TDP4 642 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 FAM92BQ6ZTR7 304 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 GTF2IRD2Q86UP8 949 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 ERI1Q8IV48 349 aaKnown RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 OR6T1Q8NGN1 323 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 ZNF420Q8TAQ5 688 aaPredicted RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 APH1BQ8WW43 257 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 SLC9A6Q92581 669 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 CDS1Q92903 461 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 ISOC1Q96CN7 298 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms