RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 PLCXD2Q0VAA5 305 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 MAP4K2Q12851 820 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 TSNAXIP1Q2TAA8 658 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 TGIF2LYQ8IUE0 185 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 RELL1Q8IUW5 271 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 C9orf106Q8NAJ2 232 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 ADCY4Q8NFM4 1077 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 OR52R1Q8NGF1 315 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 OR1J4Q8NGS1 313 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 MBD3L2Q8NHZ7 208 aaPredicted RBP13.92□□□□□ -0.18
SOD1-201ENST00000270142 TRPC4APQ8TEL6 797 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 ZNF483Q8TF39 744 aaPredicted RBP13.92□□□□□ -0.18
SOD1-201ENST00000270142 SELENOMQ8WWX9 145 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 OMA1Q96E52 524 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 LCORQ96JN0 433 aaPredicted RBP13.92□□□□□ -0.18
SOD1-201ENST00000270142 PAFAH2Q99487 392 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 OSBPL11Q9BXB4 747 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 GALNT9Q9HCQ5 603 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 EHD3Q9NZN3 535 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 ZNF639Q9UID6 485 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 FOXD3Q9UJU5 478 aaPredicted RBP13.92□□□□□ -0.18
SOD1-201ENST00000270142 ZNF225Q9UK10 706 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 CFL2Q9Y281 166 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.92□□□□□ -0.18
SOD1-201ENST00000270142 EXPH5Q8NEV8 1989 aa13.92□□□□□ -0.18
SOD1-201ENST00000270142 FREM3P0C091 2139 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 VPS13CQ709C8 3753 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 PRRC2AP48634 2157 aaKnown RBP13.91□□□□□ -0.18
SOD1-201ENST00000270142 CDH16O75309 829 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 UGT2B11O75310 529 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 GUCY1B2O75343 617 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 SBK3P0C264 359 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 NAGAP17050 411 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 CTSSP25774 331 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 CNTFP26441 200 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 SLCO1A2P46721 670 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 CKAP4Q07065 602 aaKnown RBP13.91□□□□□ -0.18
SOD1-201ENST00000270142 SF3B4Q15427 424 aaKnown RBP eCLIP13.91□□□□□ -0.187e-7■■□□□ 14.3
SOD1-201ENST00000270142 LTB4RQ15722 352 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 TRMT12Q53H54 448 aaKnown RBP13.91□□□□□ -0.18
SOD1-201ENST00000270142 SLC30A6Q6NXT4 461 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 NUP54Q7Z3B4 507 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 CHDHQ8NE62 594 aaPredicted RBP13.91□□□□□ -0.18
SOD1-201ENST00000270142 GOT1L1Q8NHS2 421 aaPredicted RBP13.91□□□□□ -0.18
SOD1-201ENST00000270142 LINC01560Q8TB33 94 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 CTHRC1Q96CG8 243 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 KLHL29Q96CT2 875 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 CNRIP1Q96F85 164 aaPredicted RBP13.91□□□□□ -0.18
SOD1-201ENST00000270142 HBEGFQ99075 208 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 KLRF1Q9NZS2 232 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 FETUBQ9UGM5 382 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 MAPRE3Q9UPY8 281 aa13.91□□□□□ -0.18
SOD1-201ENST00000270142 TUBAL3A6NHL2 446 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 A8MT66 165 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 EEF1E1-BLOC1S5C9J1V9 151 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 ACOX3O15254 700 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 EEF1E1O43324 174 aaKnown RBP13.9□□□□□ -0.18
SOD1-201ENST00000270142 ICOSLGO75144 302 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 OTCP00480 354 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 RHOXF2BP0C7M4 288 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 PCSK2P16519 638 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 CSNK2A2P19784 350 aaPredicted RBP13.9□□□□□ -0.18
SOD1-201ENST00000270142 DNASE1P24855 282 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 ALDH9A1P49189 494 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 SERPINB9P50453 376 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 MRPS35P82673 323 aaKnown RBP13.9□□□□□ -0.18
SOD1-201ENST00000270142 DAZAP2Q15038 168 aaPredicted RBP13.9□□□□□ -0.18
SOD1-201ENST00000270142 TCHHL1Q5QJ38 904 aaPredicted RBP13.9□□□□□ -0.18
SOD1-201ENST00000270142 TMEM151AQ8N4L1 468 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 C1orf52Q8N6N3 182 aaKnown RBP13.9□□□□□ -0.18
SOD1-201ENST00000270142 POM121Q96HA1 1249 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 ZNF681Q96N22 645 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 MRPL57Q9BQC6 102 aaKnown RBP13.9□□□□□ -0.18
SOD1-201ENST00000270142 C1QTNF3Q9BXJ4 246 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 MRPL46Q9H2W6 279 aaKnown RBP13.9□□□□□ -0.18
SOD1-201ENST00000270142 CALHM2Q9HA72 323 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 BRF2Q9HAW0 419 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 SERHLQ9NQF3 203 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 JKAMPQ9P055 326 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 HEY2Q9UBP5 337 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 TRPS1Q9UHF7 1281 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 SNX6Q9UNH7 406 aa13.9□□□□□ -0.18
SOD1-201ENST00000270142 PRAMEF25A6NGN4 478 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 FRG2CA6NGY1 282 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 TRIM49D1C9J1S8 452 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 POC1B-GALNT4F8VUJ3 575 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 OR4F21O95013 312 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 IL18BPO95998 194 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 ACTL6AO96019 429 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 TMIGD3P0DMS9 266 aaPredicted RBP13.89□□□□□ -0.19
SOD1-201ENST00000270142 EPXP11678 715 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 COL6A2P12110 1019 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 KLK2P20151 261 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 OPRM1P35372 400 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 EMDP50402 254 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 TRA2BP62995 288 aaKnown RBP13.89□□□□□ -0.19
SOD1-201ENST00000270142 SNTA1Q13424 505 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 RCAN2Q14206 197 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 KRTAP21-3Q3LHN1 58 aa13.89□□□□□ -0.19
SOD1-201ENST00000270142 PLXDC2Q6UX71 529 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms