RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 DEF8Q6ZN54 512 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 WDR53Q7Z5U6 358 aaPredicted RBP15.58■□□□□ 0.08
CCDC40-201ENST00000269318 HMGN2P46Q86SG4 172 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 ENTHD1Q8IYW4 607 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 SDR16C5Q8N3Y7 309 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 SLC16A11Q8NCK7 471 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 DNASE2BQ8WZ79 361 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 UBE2FQ969M7 185 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 SLC38A3Q99624 504 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 TUBA1CQ9BQE3 449 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 PINK1Q9BXM7 581 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 A4GNTQ9UNA3 340 aa15.58■□□□□ 0.08
CCDC40-201ENST00000269318 DUXAA6NLW8 204 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 SRPX2O60687 465 aaPredicted RBP15.57■□□□□ 0.08
CCDC40-201ENST00000269318 WBP4O75554 376 aaKnown RBP15.57■□□□□ 0.08
CCDC40-201ENST00000269318 GASTP01350 101 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 H1F0P07305 194 aaKnown RBP15.57■□□□□ 0.08
CCDC40-201ENST00000269318 ELAVL4P26378 380 aaKnown RBP15.57■□□□□ 0.08
CCDC40-201ENST00000269318 FMO3P31513 532 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 TTKP33981 857 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 GGT2P36268 569 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 CSNK1EP49674 416 aaKnown RBP15.57■□□□□ 0.08
CCDC40-201ENST00000269318 RAB38P57729 211 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 PIGFQ07326 219 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 SEC23BQ15437 767 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 DEFB133Q30KQ1 61 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 FAM214AQ32MH5 1076 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 PROX2Q3B8N5 592 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 TRMT12Q53H54 448 aaKnown RBP15.57■□□□□ 0.08
CCDC40-201ENST00000269318 EXOSC6Q5RKV6 272 aaKnown RBP15.57■□□□□ 0.08
CCDC40-201ENST00000269318 TAGAPQ8N103 731 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 GALNT15Q8N3T1 639 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 AQP11Q8NBQ7 271 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 OR9A4Q8NGU2 314 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 ADAMTS15Q8TE58 950 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 APH1BQ8WW43 257 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 TANKQ92844 425 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 TCTN2Q96GX1 697 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 QRSL1Q9H0R6 528 aaKnown RBP15.57■□□□□ 0.08
CCDC40-201ENST00000269318 DUSP21Q9H596 190 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 CXorf21Q9HAI6 301 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 UCKL1Q9NWZ5 548 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 CALML5Q9NZT1 146 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 C19orf53Q9UNZ5 99 aaPredicted RBP15.57■□□□□ 0.08
CCDC40-201ENST00000269318 USP34Q70CQ2 3546 aa15.57■□□□□ 0.08
CCDC40-201ENST00000269318 RDH16O75452 317 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 MED26O95402 600 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 CXCL12P48061 93 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 GABRA4P48169 554 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 ATAD3BQ5T9A4 648 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 FAM92BQ6ZTR7 304 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 OR6T1Q8NGN1 323 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 OR13F1Q8NGS4 319 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 ANKRD9Q96BM1 317 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-201ENST00000269318 ZG16BQ96DA0 208 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 ZNF285Q96NJ3 590 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 ZNF556Q9HAH1 456 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 FANCEQ9HB96 536 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 ANKHQ9HCJ1 492 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 SLC9A8Q9Y2E8 581 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 EML5Q05BV3 1969 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 A0A087WV62 115 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 ENO4A6NNW6 628 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 PTGES3LE9PB15 166 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 ZNF701M0R085 212 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-201ENST00000269318 SYT5O00445 386 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 STK25O00506 426 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 SDC3O75056 442 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 PIAS2O75928 621 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 AGR2O95994 175 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 DCNP07585 359 aaKnown RBP15.56■□□□□ 0.08
CCDC40-201ENST00000269318 IFI6P09912 130 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 POU2F1P14859 743 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 PDX1P52945 283 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 SLC35A2P78381 396 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 MLLT1Q03111 559 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-201ENST00000269318 MGAT2Q10469 447 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 LSAMPQ13449 338 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 PIN1Q13526 163 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-201ENST00000269318 NPTX1Q15818 432 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 SMN1Q16637 294 aaKnown RBP15.56■□□□□ 0.08
CCDC40-201ENST00000269318 C14orf28Q4W4Y0 310 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 GTF2IRD2BQ6EKJ0 949 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 C16orf62Q7Z3J2 963 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 GTF2IRD2Q86UP8 949 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 CLVS1Q8IUQ0 354 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-201ENST00000269318 CDS1Q92903 461 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 GTPBP3Q969Y2 492 aaKnown RBP15.56■□□□□ 0.08
CCDC40-201ENST00000269318 ISOC1Q96CN7 298 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 CNDP2Q96KP4 475 aaKnown RBP15.56■□□□□ 0.08
CCDC40-201ENST00000269318 NODALQ96S42 347 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 PRDM6Q9NQX0 595 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 CDC14AQ9UNH5 594 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 RNF6Q9Y252 685 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 CHST2Q9Y4C5 530 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 ABCA7Q8IZY2 2146 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 CEP192Q8TEP8 1941 aa15.56■□□□□ 0.08
CCDC40-201ENST00000269318 FAAHO00519 579 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 PLOD3O60568 738 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 FCMRO60667 390 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms