RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 SNAP47Q5SQN1 464 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 NDUFAF5Q5TEU4 345 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 GPR55Q9Y2T6 319 aaPredicted RBP20.87■□□□□ 0.93
CDR2-201ENST00000268383 KIAA0355O15063 1070 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 SCAMP1O15126 338 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 CISD3P0C7P0 127 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 MYL12AP19105 171 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 DDOSTP39656 456 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 WNT4P56705 351 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 FNDC3BQ53EP0 1204 aaKnown RBP20.87■□□□□ 0.93
CDR2-201ENST00000268383 PRICKLE2Q7Z3G6 844 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 GRASPQ7Z6J2 395 aaPredicted RBP20.87■□□□□ 0.93
CDR2-201ENST00000268383 OR4F15Q8NGB8 312 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 KCTD7Q96MP8 289 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 TRMT61BQ9BVS5 477 aaKnown RBP20.87■□□□□ 0.93
CDR2-201ENST00000268383 HDHD5Q9BXW7 423 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 SAP130Q9H0E3 1048 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 DPEP2Q9H4A9 486 aa20.87■□□□□ 0.93
CDR2-201ENST00000268383 A0A1W2PRQ8 180 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 SLC35F4A4IF30 521 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 C4orf51C9J302 202 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 PGRMC2O15173 223 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 ADRB3P13945 408 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 MAN2A2P49641 1150 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 AMZ2Q86W34 360 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 NUDT13Q86X67 352 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 CCDC116Q8IYX3 515 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 DTX3Q8N9I9 347 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 LINC01555Q8NAE3 123 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 FGF11Q92914 225 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 AMDHD1Q96NU7 426 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 TMED9Q9BVK6 235 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 SLC22A4Q9H015 551 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 TBC1D17Q9HA65 648 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 ZSCAN32Q9NX65 697 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 SNX7Q9UNH6 387 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 CHD9Q3L8U1 2897 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 A0A087WUU8 490 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 SHISA3A0PJX4 238 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 FAM172BPA6NC97 362 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 OTOL1A6NHN0 477 aaPredicted RBP20.86■□□□□ 0.93
CDR2-201ENST00000268383 CPSF4LA6NMK7 179 aaKnown RBP20.86■□□□□ 0.93
CDR2-201ENST00000268383 IL1AP01583 271 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 PCCBP05166 539 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 MYL9P24844 172 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 CDK5Q00535 292 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 CDK10Q15131 360 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 GPAT3Q53EU6 434 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 ANKRD33Q7Z3H0 272 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 DCUN1D3Q8IWE4 304 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 SLC7A6Q92536 515 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 FAM46AQ96IP4 442 aaKnown RBP20.86■□□□□ 0.93
CDR2-201ENST00000268383 MSLNLQ96KJ4 702 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 RNF208Q9H0X6 261 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 RHBGQ9H310 441 aa20.86■□□□□ 0.93
CDR2-201ENST00000268383 SF3B6Q9Y3B4 125 aaKnown RBP20.86■□□□□ 0.93
CDR2-201ENST00000268383 HPGDSO60760 199 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 SSR2P43308 183 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 SLC9A3P48764 834 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 ALDH6A1Q02252 535 aaKnown RBP20.85■□□□□ 0.93
CDR2-201ENST00000268383 THOC7Q6I9Y2 204 aaKnown RBP20.85■□□□□ 0.93
CDR2-201ENST00000268383 CLCA3PQ9Y6N3 262 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 A0A1W2PPV9 198 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 HMX3A6NHT5 357 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 POLR1CO15160 346 aaPredicted RBP20.85■□□□□ 0.93
CDR2-201ENST00000268383 HMGN2P05204 90 aaKnown RBP20.85■□□□□ 0.93
CDR2-201ENST00000268383 VIPR2P41587 438 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 CCR8P51685 355 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 C9orf64Q5T6V5 341 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 DDI2Q5TDH0 399 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 SLC30A6Q6NXT4 461 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 XKRXQ6PP77 449 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 FAM92BQ6ZTR7 304 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 SNX18Q96RF0 628 aa20.85■□□□□ 0.93
CDR2-201ENST00000268383 RB1P06400 928 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 LIMS3P0CW19 117 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 LIMS4P0CW20 117 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 NR2F6P10588 404 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 FRKP42685 505 aaPredicted RBP20.84■□□□□ 0.93
CDR2-201ENST00000268383 ZNF296Q8WUU4 475 aaPredicted RBP20.84■□□□□ 0.93
CDR2-201ENST00000268383 RGMAQ96B86 450 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 LRIG1Q96JA1 1093 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 MAFFQ9ULX9 164 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 IRAK3Q9Y616 596 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 C2orf92A0A1B0GVN3 265 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 CEBPBP17676 345 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 CLCNKAP51800 687 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 EFNB1P98172 346 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 ASAH1Q13510 395 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 PLK5Q496M5 336 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 ARHGAP15Q53QZ3 475 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 SLC35F1Q5T1Q4 408 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 TMEM107Q6UX40 140 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 VRK2Q86Y07 508 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 OR8K5Q8NH50 307 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 RNF170Q96K19 258 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 LINC00615Q96LM1 132 aaPredicted RBP20.84■□□□□ 0.93
CDR2-201ENST00000268383 MCOLN1Q9GZU1 580 aa20.84■□□□□ 0.93
CDR2-201ENST00000268383 MDC1Q14676 2089 aaKnown RBP20.84■□□□□ 0.93
CDR2-201ENST00000268383 IGKV1-8A0A0C4DH67 115 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms