RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 GMEB2Q9UKD1 530 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 SCML1Q9UN30 329 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 MYO16Q9Y6X6 1858 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 EP300Q09472 2414 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 NCOR1O75376 2440 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 LRRN3E7EW58 273 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 VEGFDO43915 354 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 ARL6IP5O75915 188 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 UQCRC2P22695 453 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 OR3A3P47888 321 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 DHPSP49366 369 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 MAN2A2P49641 1150 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 CCR4P51679 360 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 SNTB2Q13425 540 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 PRSS36Q5K4E3 855 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 TMIGD1Q6UXZ0 262 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 VASH1Q7L8A9 365 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 NUDT13Q86X67 352 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 UBQLNLQ8IYU4 475 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 IQCF1Q8N6M8 205 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF566Q969W8 418 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 YIPF6Q96EC8 236 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 ALG14Q96F25 216 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 OR51I1Q9H343 314 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 LRRN3Q9H3W5 708 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 RNF167Q9H6Y7 350 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 TBC1D24Q9ULP9 559 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 FKBP7Q9Y680 259 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 MICAL3Q7RTP6 2002 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 LOC102723532A0A0G2JNH3 316 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 C2orf92A0A1B0GVN3 265 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 J3QLW9 94 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF19P17023 458 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF10P21506 573 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 ETV3P41162 512 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 RPS26P62854 115 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 FAPQ12884 760 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 SNTA1Q13424 505 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF234Q14588 700 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 SF3A2Q15428 464 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 CTSL3PQ5NE16 218 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 PRPF38BQ5VTL8 546 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 FAM219BQ5XKK7 198 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 RANBP3LQ86VV4 465 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 SHDQ96IW2 340 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 FYTTD1Q96QD9 318 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 FERD3LQ96RJ6 166 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 CD207Q9UJ71 328 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 SCAMP1O15126 338 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 OR6A2O95222 327 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 IL1AP01583 271 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 HLA-DQA2P01906 255 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 PCCBP05166 539 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 TIMP2P16035 220 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 CDKN2CP42773 168 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 TMEM115Q12893 351 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 SLX4IPQ5VYV7 408 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF765Q7L2R6 523 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 OR2T35Q8NGX2 323 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 COQ8AQ8NI60 647 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 CEP76Q8TAP6 659 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 NXPE3Q969Y0 559 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 ELSPBP1Q96BH3 223 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 TMEM27Q9HBJ8 222 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 NUDT15Q9NV35 164 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 FBXW2Q9UKT8 454 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 NUP50Q9UKX7 468 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 NDRG4Q9ULP0 352 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 TEX13CA0A0J9YWL9 993 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 PROM1O43490 865 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 TRIM3O75382 744 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 NUDT7P0C024 238 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 H2AFB2P0C5Z0 115 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 HOXB2P14652 356 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 LHCGRP22888 699 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 NTSR1P30989 418 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 HTR3AP46098 478 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 CAPZA2P47755 286 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 PSMA6P60900 246 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 SLC25A25Q6KCM7 469 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 AMZ2Q86W34 360 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 TDHQ8IZJ6 230 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 ADAMTS19Q8TE59 1207 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 ACOT12Q8WYK0 555 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 KLK6Q92876 244 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 SLC35B4Q969S0 331 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 BHLHE41Q9C0J9 482 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 IKZF2Q9UKS7 526 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 A0A075B6Q4 140 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 A0A0G2JPF8 293 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 HNRNPCL3B7ZW38 293 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 GFRA2O00451 464 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 MMP20O60882 483 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 HNRNPCL4P0DMR1 293 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 ADRB3P13945 408 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 IDSP22304 550 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 GJA4P35212 333 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 MEF2AQ02078 507 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 PRAMEF14Q5SWL7 426 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 PRAMEF13Q5VWM6 474 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms