RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 C1orf185Q5T7R7 199 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 FAM111BQ6SJ93 734 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 SEM1Q6ZVN7 128 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 TRMT10CQ7L0Y3 403 aaKnown RBP8.91□□□□□ -0.98
VPS41-201ENST00000265745 VWA5B2Q8N398 1253 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 C1orf52Q8N6N3 182 aaKnown RBP8.91□□□□□ -0.98
VPS41-201ENST00000265745 CDYL2Q8N8U2 506 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 CTHRC1Q96CG8 243 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 ZNF681Q96N22 645 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 RILPQ96NA2 401 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 GNRHR2Q96P88 292 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 HBEGFQ99075 208 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 NXF5Q9H1B4 397 aaKnown RBP8.91□□□□□ -0.98
VPS41-201ENST00000265745 SLC6A15Q9H2J7 730 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 UBQLN3Q9H347 655 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 MAT2BQ9NZL9 334 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 Q9UFV3 132 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 CFL2Q9Y281 166 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 DTX4Q9Y2E6 619 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 TEP1Q99973 2627 aaKnown RBP8.9□□□□□ -0.98
VPS41-201ENST00000265745 SPG11Q96JI7 2443 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 DCHS2Q6V1P9 2916 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 AHRRA9YTQ3 701 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 FAM47E-STBD1D6RA91 191 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 KIF2AO00139 706 aaPredicted RBP8.9□□□□□ -0.98
VPS41-201ENST00000265745 RIPK2O43353 540 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 ULK1O75385 1050 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 ERAL1O75616 437 aaKnown RBP8.9□□□□□ -0.98
VPS41-201ENST00000265745 SUPT7LO94864 414 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 CBX7O95931 251 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 KRT6AP02538 564 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 KRT6BP04259 564 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 HPNP05981 417 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 FAM153BP0C7A2 387 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 HSD3B1P14060 373 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 CHN1P15882 459 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 IMPDH1P20839 514 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 ATP5F1P24539 256 aaPredicted RBP8.9□□□□□ -0.98
VPS41-201ENST00000265745 HSD3B2P26439 372 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 KRT6CP48668 564 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 TMED10P49755 219 aaKnown RBP8.9□□□□□ -0.98
VPS41-201ENST00000265745 CDK9P50750 372 aaKnown RBP8.9□□□□□ -0.98
VPS41-201ENST00000265745 PRKAA2P54646 552 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 DUSP2Q05923 314 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 EXOSC7Q15024 291 aaKnown RBP8.9□□□□□ -0.98
VPS41-201ENST00000265745 FAM153CQ494X1 144 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 TRMT12Q53H54 448 aaKnown RBP8.9□□□□□ -0.98
VPS41-201ENST00000265745 TCHHL1Q5QJ38 904 aaPredicted RBP8.9□□□□□ -0.98
VPS41-201ENST00000265745 RIPPLY2Q5TAB7 128 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 C6orf163Q5TEZ5 329 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 NUP54Q7Z3B4 507 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 BTLAQ7Z6A9 289 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 IFT20Q8IY31 132 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 ULK2Q8IYT8 1036 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 PRR22Q8IZ63 422 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 LINC00528Q8N1L1 170 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 LIX1Q8N485 282 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 SIMC1Q8NDZ2 872 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 ADCY4Q8NFM4 1077 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 KIF18AQ8NI77 898 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 METTL6Q8TCB7 284 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 KLHL29Q96CT2 875 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 CNRIP1Q96F85 164 aaPredicted RBP8.9□□□□□ -0.98
VPS41-201ENST00000265745 ZNF597Q96LX8 424 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 TMEM237Q96Q45 408 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 ZNF382Q96SR6 550 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 TIMP4Q99727 224 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 FAIM2Q9BWQ8 316 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 TXLNGYQ9BZA5 131 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 BRINP2Q9C0B6 783 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 ACBD3Q9H3P7 528 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 ZNF780BQ9Y6R6 833 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 ZNF407Q9C0G0 2248 aa8.9□□□□□ -0.98
VPS41-201ENST00000265745 TACC2O95359 2948 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 C15orf38-AP3S2A0A0A6YYH1 394 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 ACOX3O15254 700 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 CDH16O75309 829 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 PPM1BO75688 479 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 TRAPPC6AO75865 159 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 EPPINO95925 133 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 DRD2P14416 443 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 DRD5P21918 477 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 GDF1P27539 372 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 PPICP45877 212 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 ALDH9A1P49189 494 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 EMDP50402 254 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 DLX5P56178 289 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 RPP38P78345 283 aaKnown RBP8.89□□□□□ -0.99
VPS41-201ENST00000265745 RAE1P78406 368 aaKnown RBP8.89□□□□□ -0.99
VPS41-201ENST00000265745 CRYZQ08257 329 aaKnown RBP8.89□□□□□ -0.99
VPS41-201ENST00000265745 CSTF3Q12996 717 aaKnown RBP8.89□□□□□ -0.99
VPS41-201ENST00000265745 LCP2Q13094 533 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 SLC29A2Q14542 456 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 TESK1Q15569 626 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 LTB4RQ15722 352 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 SLC25A35Q3KQZ1 300 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 TIGD3Q6B0B8 471 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 VASNQ6EMK4 673 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 FAM180BQ6P0A1 224 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 TMEM81Q6P7N7 255 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms