RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 DUX4L6P0CJ89 424 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 DUX4L7P0CJ90 424 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 C5AR1P21730 350 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 CPN2P22792 545 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 KELP23276 732 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 ITGB7P26010 798 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 RORCP51449 518 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 FOXK1P85037 733 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 ZNF763Q0D2J5 394 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 SLC9A5Q14940 896 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 SMAD2Q15796 467 aaKnown RBP9.07□□□□□ -0.96
SIM1-201ENST00000262901 AADACL4Q5VUY2 407 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 RNF111Q6ZNA4 994 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 NUDT13Q86X67 352 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 FUNDC1Q8IVP5 155 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 CHERPQ8IWX8 916 aaKnown RBP9.07□□□□□ -0.96
SIM1-201ENST00000262901 TMEM102Q8N9M5 508 aaPredicted RBP9.07□□□□□ -0.96
SIM1-201ENST00000262901 TSTD1Q8NFU3 115 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 ZNF675Q8TD23 568 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 CA5BP1Q8WTZ4 195 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 PIGKQ92643 395 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 UBXN10Q96LJ8 280 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 TMED9Q9BVK6 235 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 NPLQ9BXD5 320 aaPredicted RBP9.07□□□□□ -0.96
SIM1-201ENST00000262901 C1QTNF1Q9BXJ1 281 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 TTTY10Q9BZA0 68 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 LUZP4Q9P127 313 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 C5AR2Q9P296 337 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 DUX4Q9UBX2 424 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 URADA6NGE7 173 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 RLN1P04808 185 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 VAMP1P23763 118 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 UQCRC1P31930 480 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 RNF144AP50876 292 aaPredicted RBP9.07□□□□□ -0.96
SIM1-201ENST00000262901 CLDN8P56748 225 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 MLF2Q15773 248 aaPredicted RBP9.07□□□□□ -0.96
SIM1-201ENST00000262901 EXOC3L2Q2M3D2 409 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 LCN1P1Q5VSP4 162 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 SH2D5Q6ZV89 423 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 STX12Q86Y82 276 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 CNTN4Q8IWV2 1026 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 LMNTD1Q8N9Z9 388 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 OR52N1Q8NH53 320 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 PRO3102Q9H379 93 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 XKR8Q9H6D3 395 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 UCK1Q9HA47 277 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 ING4Q9UNL4 249 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 DOCK6Q96HP0 2047 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 ARHGEF33A8MVX0 844 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 H3BSH0 61 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 GTPBP1O00178 669 aaKnown RBP9.07□□□□□ -0.96
SIM1-201ENST00000262901 ACOT8O14734 319 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 KHDRBS3O75525 346 aaKnown RBP9.07□□□□□ -0.96
SIM1-201ENST00000262901 HIST1H2ABP04908 130 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 CBSLP0DN79 551 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 C4BPBP20851 252 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 PTX3P26022 381 aaPredicted RBP9.07□□□□□ -0.96
SIM1-201ENST00000262901 CBSP35520 551 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 CSTF1Q05048 431 aaKnown RBP9.07□□□□□ -0.96
SIM1-201ENST00000262901 SLC35F1Q5T1Q4 408 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 ZNF544Q6NX49 715 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 ARL9Q6T311 187 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 HIST3H2AQ7L7L0 130 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 MARCH9Q86YJ5 346 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 HMGB4Q8WW32 186 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 RASSF5Q8WWW0 418 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 UFD1Q92890 307 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 HIST1H2ACQ93077 130 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 RDH12Q96NR8 316 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 UCK2Q9BZX2 261 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 GPR83Q9NYM4 423 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 PTPRSQ13332 1948 aa9.07□□□□□ -0.96
SIM1-201ENST00000262901 F8W036 122 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 CD160O95971 181 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 FCER2P06734 321 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 HSF5Q4G112 596 aaPredicted RBP9.06□□□□□ -0.96
SIM1-201ENST00000262901 LIPKQ5VXJ0 399 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 TMEM215Q68D42 235 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 FAM92BQ6ZTR7 304 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 TEX19Q8NA77 164 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 SNX33Q8WV41 574 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 SLC5A11Q8WWX8 675 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 IFT27Q9BW83 186 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 ASPNQ9BXN1 380 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 ACTR6Q9GZN1 396 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 PRSS16Q9NQE7 514 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 ZFP57Q9NU63 452 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 SESN1Q9Y6P5 492 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 ANHXE9PGG2 379 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 SLC16A8O95907 504 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 IL3P08700 152 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 ADRB3P13945 408 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 DDCP20711 480 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 AKR1D1P51857 326 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 PPA1Q15181 289 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 SMN1Q16637 294 aaKnown RBP9.06□□□□□ -0.96
SIM1-201ENST00000262901 RTL4Q6ZR62 310 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 PRSS58Q8IYP2 241 aa9.06□□□□□ -0.96
SIM1-201ENST00000262901 ZNF655Q8N720 491 aaPredicted RBP9.06□□□□□ -0.96
SIM1-201ENST00000262901 SRFBP1Q8NEF9 429 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms