RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 LCMT2O60294 686 aaKnown RBP21.32■■□□□ 1
MCF2L-201ENST00000261963 TRIM3O75382 744 aaPredicted RBP21.32■■□□□ 1
MCF2L-201ENST00000261963 FCARP24071 287 aa21.32■■□□□ 1
MCF2L-201ENST00000261963 KIR2DL3P43628 341 aa21.32■■□□□ 1
MCF2L-201ENST00000261963 SNRPD2P62316 118 aaKnown RBP21.32■■□□□ 1
MCF2L-201ENST00000261963 PDZK1Q5T2W1 519 aa21.32■■□□□ 1
MCF2L-201ENST00000261963 WDR36Q8NI36 951 aaKnown RBP21.32■■□□□ 1
MCF2L-201ENST00000261963 PCBD2Q9H0N5 130 aa21.32■■□□□ 1
MCF2L-201ENST00000261963 SERHL2Q9H4I8 314 aa21.32■■□□□ 1
MCF2L-201ENST00000261963 NT5DC2Q9H857 520 aa21.32■■□□□ 1
MCF2L-201ENST00000261963 OR1A2Q9Y585 309 aa21.32■■□□□ 1
MCF2L-201ENST00000261963 ZAR1LA6NP61 321 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 C5orf58C9J3I9 102 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 HMGN4O00479 90 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 PDE9AO76083 593 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 CSF3P09919 207 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 PSKH1P11801 424 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 CHMP24386 653 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 PDGFRLQ15198 375 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 GLYR1Q49A26 553 aaPredicted RBP21.31■■□□□ 1
MCF2L-201ENST00000261963 SDE2Q6IQ49 451 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 NUDT13Q86X67 352 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 VANGL1Q8TAA9 524 aaPredicted RBP21.31■■□□□ 1
MCF2L-201ENST00000261963 MARVELD3Q96A59 401 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 NUP50Q9UKX7 468 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 DNMT3AQ9Y6K1 912 aaPredicted RBP21.31■■□□□ 1
MCF2L-201ENST00000261963 TRANK1O15050 2925 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 PPM1DO15297 605 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 OR1F1O43749 312 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 ADRA2AP08913 450 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 SLC35G4P0C7Q5 338 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 MLF2Q15773 248 aaPredicted RBP21.31■■□□□ 1
MCF2L-201ENST00000261963 TJAP1Q5JTD0 557 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 CHFRQ96EP1 664 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 MAPKAP1Q9BPZ7 522 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 TEX101Q9BY14 249 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 AICDAQ9GZX7 198 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 CCDC88CQ9P219 2028 aa21.31■■□□□ 1
MCF2L-201ENST00000261963 IGKV1-8A0A0C4DH67 115 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 TMCC2O75069 709 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 PCDH8O95206 1070 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 DGKEP52429 567 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 CSNK1G2P78368 415 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 HOXC5Q00444 222 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 GPR19Q15760 415 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 TOR2AQ5JU69 321 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 FAM46CQ5VWP2 391 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 TANGO2Q6ICL3 276 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 FBXO46Q6PJ61 603 aaPredicted RBP21.3■■□□□ 1
MCF2L-201ENST00000261963 CAMKK1Q8N5S9 505 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 RGMAQ96B86 450 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 NECTIN4Q96NY8 510 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 QRFPRQ96P65 431 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 B3GNT2Q9NY97 397 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 SERGEFQ9UGK8 458 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 A0A0G2JN53 185 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 IQCMA0A1B0GVH7 501 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 SEC14L5O43304 696 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 GJA4P35212 333 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 WASP42768 502 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 SPDYE7PQ495Y7 208 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 FRMPD2BQ6IN97 320 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 TCTN3Q6NUS6 607 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 GDPGP1Q6ZNW5 385 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 TAGAPQ8N103 731 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 UBE2J2Q8N2K1 259 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 ESX1Q8N693 406 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 GDPD1Q8N9F7 314 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 OPALINQ96PE5 141 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 TEFMQ96QE5 360 aaKnown RBP21.3■■□□□ 1
MCF2L-201ENST00000261963 INSM2Q96T92 566 aaPredicted RBP21.3■■□□□ 1
MCF2L-201ENST00000261963 WFDC6Q9BQY6 131 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 ING3Q9NXR8 418 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 CNOT2Q9NZN8 540 aaKnown RBP21.3■■□□□ 1
MCF2L-201ENST00000261963 PRKAG2Q9UGJ0 569 aa21.3■■□□□ 1
MCF2L-201ENST00000261963 DSPPQ9NZW4 1301 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 PRAMEF27A3QJZ7 478 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 CRISP1P54107 249 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 CDC42P60953 191 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 SEC23BQ15437 767 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 TATDN3Q17R31 274 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 PLET1Q6UQ28 207 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 GET4Q7L5D6 327 aaPredicted RBP21.29■■□□□ 1
MCF2L-201ENST00000261963 RBM45Q8IUH3 476 aaKnown RBP21.29■■□□□ 1
MCF2L-201ENST00000261963 OR4D11Q8NGI4 311 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 ZNF764Q96H86 408 aaPredicted RBP21.29■■□□□ 1
MCF2L-201ENST00000261963 GTPBP2Q9BX10 602 aaKnown RBP21.29■■□□□ 1
MCF2L-201ENST00000261963 PITHD1Q9GZP4 211 aaPredicted RBP21.29■■□□□ 1
MCF2L-201ENST00000261963 HEATR5BQ9P2D3 2071 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 NINQ8N4C6 2090 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 C2orf16Q68DN1 1984 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 FABP12A6NFH5 140 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 LATO43561 262 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 KAT7O95251 611 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 SCG5P05408 212 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 FHP07954 510 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 ALAS2P22557 587 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 TAGLNQ01995 201 aaKnown RBP21.29■■□□□ 1
MCF2L-201ENST00000261963 LEXMQ3ZCV2 418 aa21.29■■□□□ 1
MCF2L-201ENST00000261963 FAM205BPQ63HN1 556 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms