RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 SLC35G4P0C7Q5 338 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 PPP2R1BP30154 601 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 SDC2P34741 201 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 RPS25P62851 125 aaKnown RBP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 TMEM52BQ4KMG9 183 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 TMEM107Q6UX40 140 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 UBQLNLQ8IYU4 475 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 SPPL3Q8TCT6 385 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 CREB3L4Q8TEY5 395 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 RASSF5Q8WWW0 418 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 PAWRQ96IZ0 340 aaKnown RBP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 DMRTB1Q96MA1 342 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 C12orf66Q96MD2 445 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 QRFPRQ96P65 431 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 BBS4Q96RK4 519 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 POLDIP3Q9BY77 421 aaKnown RBP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 SRRQ9GZT4 340 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 MIXL1Q9H2W2 232 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 ACSS1Q9NUB1 689 aaPredicted RBP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 GPR55Q9Y2T6 319 aaPredicted RBP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 CMAHPQ9Y471 501 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 PLEKHM1Q9Y4G2 1056 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 ATG4BQ9Y4P1 393 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 A0A1W2PQL4 384 aaPredicted RBP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 PCDH8O95206 1070 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 CH25HO95992 272 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 VASPP50552 380 aaPredicted RBP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 HTRA4P83105 476 aaPredicted RBP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 DBPQ10586 325 aaPredicted RBP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 RPA4Q13156 261 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 SLAMF1Q13291 335 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 GPR50Q13585 617 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 TCEA2Q15560 299 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 ATAD3CQ5T2N8 411 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 C18orf63Q68DL7 685 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 FAM131AQ6UXB0 335 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 TRIM69Q86WT6 500 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 CAMKK1Q8N5S9 505 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 SLC25A46Q96AG3 418 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 ZNF707Q96C28 371 aaPredicted RBP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 C1GALT1C1Q96EU7 318 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 INSM2Q96T92 566 aaPredicted RBP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 TMEM245Q9H330 911 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 SYNPO2LQ9H987 977 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 PLEKHB1Q9UF11 243 aaPredicted RBP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 DIMT1Q9UNQ2 313 aaKnown RBP15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 KCNK6Q9Y257 313 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 NTNG1Q9Y2I2 539 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 TRANK1O15050 2925 aa15.41■□□□□ 0.06
TM9SF1-201ENST00000261789 A0A087WUU8 490 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 TBC1D3BA6NDS4 549 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 PRR23AA6NEV1 266 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 OR52A4PA6NMU1 304 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 BCL6P41182 706 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 MAN2A2P49641 1150 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 GAS1P54826 345 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 SMIM11AP58511 58 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 CDK5Q00535 292 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 CAMK1Q14012 370 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 ARHGAP19Q14CB8 494 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 ZNF517Q6ZMY9 492 aaPredicted RBP15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 GDPGP1Q6ZNW5 385 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 PRICKLE2Q7Z3G6 844 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 OR8D4Q8NGM9 314 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 TMCO6Q96DC7 493 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 CNRIP1Q96F85 164 aaPredicted RBP15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 IL20RAQ9UHF4 553 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 SLC9A8Q9Y2E8 581 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 N6AMT1Q9Y5N5 214 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 A0A1W2PR48 441 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 MAN2B1O00754 1011 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 ERI3O43414 337 aaKnown RBP15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 LGI1O95970 557 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 KRT8P05787 483 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 TSPAN19P0C672 248 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 SOX18P35713 384 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 C6orf183Q5T699 404 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 C1orf53Q5VUE5 145 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 C1orf94Q6P1W5 598 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 VRK2Q86Y07 508 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 OR2A1Q8NGT9 310 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 SUN3Q8TAQ9 357 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 JPH3Q8WXH2 748 aaPredicted RBP15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 FGF11Q92914 225 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 RNFT2Q96EX2 444 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 INSL6Q9Y581 213 aa15.4■□□□□ 0.06
TM9SF1-201ENST00000261789 CPSF4LA6NMK7 179 aaKnown RBP15.39■□□□□ 0.05
TM9SF1-201ENST00000261789 TAS2R38P59533 333 aa15.39■□□□□ 0.05
TM9SF1-201ENST00000261789 EFNB1P98172 346 aa15.39■□□□□ 0.05
TM9SF1-201ENST00000261789 PIP5KL1Q5T9C9 394 aa15.39■□□□□ 0.05
TM9SF1-201ENST00000261789 ADAMTSL4Q6UY14 1074 aa15.39■□□□□ 0.05
TM9SF1-201ENST00000261789 LHFPL3Q86UP9 236 aa15.39■□□□□ 0.05
TM9SF1-201ENST00000261789 NATD1Q8N6N6 113 aa15.39■□□□□ 0.05
TM9SF1-201ENST00000261789 DIRAS2Q96HU8 199 aa15.39■□□□□ 0.05
TM9SF1-201ENST00000261789 SAP130Q9H0E3 1048 aa15.39■□□□□ 0.05
TM9SF1-201ENST00000261789 DDX28Q9NUL7 540 aaKnown RBP15.39■□□□□ 0.05
TM9SF1-201ENST00000261789 ZNF221Q9UK13 617 aa15.39■□□□□ 0.05
TM9SF1-201ENST00000261789 EFCAB14O75071 495 aa15.39■□□□□ 0.05
TM9SF1-201ENST00000261789 PAK4O96013 591 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms